Evidence map›Paper›PMID 38017183›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2023

Machine learning for predicting diabetic metabolism in the Indian population using polar metabolomic and lipidomic features.

Nikita Jain, Bhaumik Patel, Manjesh Hanawal, Anurag R Lila, Saba Memon, Tushar Bandgar, Ashutosh Kumar

Abstract read
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In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nikita JainDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, 400076, India.
Bhaumik PatelDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, 400076, India.
Manjesh HanawalIndustrial Engineering and Operations Research, Indian Institute of Technology Bombay, Mumbai, Maharashtra, 400076, India.
Anurag R LilaSeth G.S. Medical College and KEM Hospital, Parel, Mumbai, 400012, India.
Saba MemonSeth G.S. Medical College and KEM Hospital, Parel, Mumbai, 400012, India.
Tushar BandgarSeth G.S. Medical College and KEM Hospital, Parel, Mumbai, 400012, India.
Ashutosh KumarDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, 400076, India. ashutoshk@iitb.ac.in.
Indian Institute of Technology Bombay · IN

Funding

IMAGING OF MOLECULES BY OSCILLATOR COUPLED RESONANCER01EB002018 · NIBIB · UNIVERSITY OF WASHINGTON · PI SIDLES, JOHN A · 2003 to 2004
$514k
Koita Center for Digital Health, IIT Bombay DO/2021-CFDH002-005Wadhwani Research Centre for Bioengineering DO/2018-WRCB002-022
6 · The paper itself

Abstract

aimsTo identify metabolite and lipid biomarkers of diabetes in the Indian subpopulation in newly diagnosed diabetic and long-term diabetic individuals. To utilize the global polar metabolomic and lipidomic profiles to predict the susceptibility of an individual to diabetes using machine learning algorithms. MATERIALS AND

methods87 individuals, including healthy, newly diabetic, and long-term diabetics on medication, were included in the study. Post consent, their serum was used to isolate polar metabolome and lipidome. NMR and LCMS were used to identify the polar metabolites and lipids, respectively. Statistical analysis was done to determine significantly altered molecules. NMR and LCMS comprehensive data were utilized to generate diabetic models using machine learning algorithms. 10 more individuals (pre-diabetic) were recruited, and their polar metabolomic and lipidomic profiles were generated. Pre-diabetic metabolic profiles were then utilized to predict the diabetic status of the metabolome and lipidome beyond glucose levels.

resultsMannose, Betaine, Xanthine, Triglyceride (38:1), Sphingomyelin (d63:7), and Phosphatidic acid (37:2) are some of the top key biomarkers of diabetes. The predictive model generated showed the receiver operating characteristic area under the curve (ROC-AUC) as 1 on both test and validation data indicating excellent accuracy. This model then predicted the diabetic closeness of the metabolism of pre-diabetic individuals based on probability scores.

conclusionPolar metabolic and lipid profile of diabetic individuals is very different from that of healthy individuals. Lipid profile alters before the polar metabolic profile in diabetes-susceptible individuals. Without regard to glucose, the diabetic closeness of the metabolism of any individual can be determined.

Indexed as

Diabetes MellitusPrediabetic StateBiomarkersGlucoseHumansLipidomicsMachine LearningMetabolomicsTriglyceridesBiomarkersGlucoseTriglyceridesBiomarkerLCMSMachine learningMetabolismNMRType 2 diabetes mellitus

Identifiers

PMID38017183
OpenAlexW4389077434

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.