Evidence map›Paper›PMID 38016635›Full record

ArticleJournal of the Royal Society, Interface2023

Poisson representation: a bridge between discrete and continuous models of stochastic gene regulatory networks.

Xinyu Wang, Youming Li, Chen Jia

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Xinyu WangApplied and Computational Mathematics Division, Beijing Computational Science Research Center, Beijing 100193, People's Republic of China.
Youming LiSchool of Mathematical Sciences, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China.
Chen JiaApplied and Computational Mathematics Division, Beijing Computational Science Research Center, Beijing 100193, People's Republic of China.ORCID 0000-0002-3375-4373

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stochastic gene expression dynamics can be modelled either discretely or continuously. Previous studies have shown that the mRNA or protein number distributions of some simple discrete and continuous gene expression models are related by Gardiner's Poisson representation. Here, we systematically investigate the Poisson representation in complex stochastic gene regulatory networks. We show that when the gene of interest is unregulated, the discrete and continuous descriptions of stochastic gene expression are always related by the Poisson representation, no matter how complex the model is. This generalizes the results obtained in Dattani & Barahona (Dattani & Barahona 2017

Indexed as

Gene Regulatory NetworksComputer SimulationStochastic Processesanalytical solutionchemical master equationgene expressiongene networkgene regulationstochastic hybrid system

Identifiers

PMID38016635
PMCPMC10684348

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.