Evidence map›Paper›PMID 38014205›Full record

ArticlebioRxiv : the preprint server for biology2023

A chromosome-level genome for the nudibranch gastropod

Jessica A Goodheart, Robin A Rio, Neville F Taraporevala, Rose A Fiorenza, Seth R Barnes, Kevin Morrill, Mark Allan C Jacob, Carl Whitesel, Park Masterson, Grant O Batzel and 4 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Jessica A GoodheartDivision of Invertebrate Zoology, American Museum of Natural History, New York, NY USA.ORCID 0000-0003-0754-5751
Robin A RioBioengineering Department, Stanford University, Stanford, CA, USA.
Neville F TaraporevalaScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Rose A FiorenzaScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Seth R BarnesScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Kevin MorrillScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Mark Allan C JacobScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Carl WhiteselScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Park MastersonScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Grant O BatzelScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-2560-8608
Hereroa T JohnstonScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0001-8477-596X
M Desmond RamirezDepartment of Biology, University of Massachusetts Amherst, Amherst, MA, USA.ORCID 0000-0003-3873-6999
Paul S KatzDepartment of Biology, University of Massachusetts Amherst, Amherst, MA, USA.ORCID 0000-0003-0786-1287
Deirdre C LyonsScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-2644-5214
Scripps Institution of Oceanography · USUniversity of Massachusetts Amherst · USAmerican Museum of Natural History · USStanford University · USUtah State University · US

Funding

A 5-dimensional connectomics approach to the neural basis of behaviorU01NS108637 · NINDS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI KATZ, PAUL S · 2018 to 2020
$3.4M
A Connectomic Analysis of a Developing Brain Undergoing NeurogenesisR01NS133654 · NINDS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI Paul S Katz · 2023 to 2026
$2.6M
NeurodevelopmentU01NS123972 · NINDS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI LYONS, DEIRDRE C · 2021 to 2021
$1.0M
NINDS NIH HHS R01 NS133654NINDS NIH HHS U01 NS108637NINDS NIH HHS U01 NS123972
6 · The paper itself

Abstract

How novel phenotypes originate from conserved genes, processes, and tissues remains a major question in biology. Research that sets out to answer this question often focuses on the conserved genes and processes involved, an approach that explicitly excludes the impact of genetic elements that may be classified as clade-specific, even though many of these genes are known to be important for many novel, or clade-restricted, phenotypes. This is especially true for understudied phyla such as mollusks, where limited genomic and functional biology resources for members of this phylum has long hindered assessments of genetic homology and function. To address this gap, we constructed a chromosome-level genome for the gastropod

Indexed as

differential gene expressionGastropodalineage-restricted genesnoveltyNudibranchia

Identifiers

PMID38014205
PMCPMC10680569
OpenAlexW4385633725

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.