Evidence map›Paper›PMID 38014202›Full record

ArticlemedRxiv : the preprint server for health sciences2023

Dynamic establishment and maintenance of the human intestinal B cell population and repertoire following transplantation.

Jianing Fu, Thomas Hsiao, Elizabeth Waffarn, Wenzhao Meng, Katherine D Long, Kristjana Frangaj, Rebecca Jones, Alaka Gorur, Areen Shtewe, Muyang Li and 19 more

Open access · greenAbstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 3 institutions in 2 countries.

Jianing FuColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.ORCID 0000-0003-1500-5405
Thomas HsiaoDepartment of Human Biology, University of Haifa, Haifa, Israel.
Elizabeth WaffarnColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Wenzhao MengDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Katherine D LongColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Kristjana FrangajColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Rebecca JonesColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Alaka GorurColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Areen ShteweDepartment of Human Biology, University of Haifa, Haifa, Israel.
Muyang LiDepartment of Pathology, Columbia University, New York, NY, USA.
Constanza Bay MuntnichColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Kortney RogersColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Wenyu JiaoColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Monica VelascoDepartment of Pediatrics, Columbia University, New York, NY, USA.
Rei MatsumotoDepartment of Microbiology and Immunology, Columbia University, New York, NY, USA.
Masaru KubotaDepartment of Microbiology and Immunology, Columbia University, New York, NY, USA.
Steven WellsDepartment of Microbiology and Immunology, Columbia University, New York, NY, USA.
Nichole DanzlColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Shilpa RavellaDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, NY, USA.
Alina IugaDepartment of Pathology, Columbia University, New York, NY, USA.
Elena-Rodica VasilescuDepartment of Pathology, Columbia University, New York, NY, USA.
Adam GriesemerColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Joshua WeinerColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Donna L FarberDepartment of Microbiology and Immunology, Columbia University, New York, NY, USA.
Eline T Luning PrakDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Mercedes MartinezDepartment of Pediatrics, Columbia University, New York, NY, USA.
Tomoaki KatoDepartment of Surgery, Columbia University, New York, NY, USA.
Uri HershbergDepartment of Human Biology, University of Haifa, Haifa, Israel.ORCID 0000-0002-6425-5980
Megan SykesColumbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY, USA.
Columbia University · USUniversity of Haifa · ILUniversity of Pennsylvania · US

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Robert H. Vonderheide · 1985 to 2026
$222.3M
Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Ronald G Collman · 1999 to 2026
$78.6M
Transcriptomics and Repertoire ProfilingP01AI106697 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Donna L. Farber · 2013 to 2026
$31.3M
Training in Translational Immunology ResearchT32AI148099 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SYKES, MEGAN · 2020 to 2024
$1.4M
BD Biosciences InfluxS10OD020056 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SNOECK, HANS-WILLEM E · 2015 to 2015
$600k
Becton Dickinson LSR II Analytical Flow CytometerS10RR027050 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CLYNES, RAPHAEL A. · 2011 to 2011
$413k
NCI NIH HHS P30 CA016520NCRR NIH HHS S10 RR027050NIAID NIH HHS P01 AI106697NIAID NIH HHS P30 AI045008NIAID NIH HHS T32 AI148099NIH HHS S10 OD020056
6 · The paper itself

Abstract

It is unknown how intestinal B cell populations and B cell receptor (BCR) repertoires are established and maintained over time in humans. Following intestinal transplantation (ITx), surveillance ileal mucosal biopsies provide a unique opportunity to map the dynamic establishment of gut lymphocyte populations. Using polychromatic flow cytometry that includes HLA allele group-specific mAbs distinguishing donor from recipient cells along with high throughput BCR sequencing, we tracked the establishment of recipient B cell populations and BCR repertoire in the allograft mucosa of ITx recipients. We confirm the early presence of naïve donor B cells in the circulation and, for the first time, document the establishment of recipient B cell populations, including B resident memory cells, in the intestinal allograft mucosa. Recipient B cell repopulation of the allograft was most rapid in infant (<1 year old)-derived allografts and, unlike T cell repopulation, did not correlate with rejection rates. While recipient memory B cell populations were increased in graft mucosa compared to circulation, naïve recipient B cells remained detectable in the graft mucosa for years. Comparisons of peripheral and intra-mucosal B cell repertoires in the absence of rejection revealed increased BCR mutation rates and clonal expansion in graft mucosa compared to circulating B cells, but these parameters did not increase markedly after the first year post-transplant. Furthermore, clonal mixing between the allograft mucosa and the circulation was significantly greater in ITx recipients, even years after transplantation, than in healthy control adults. Collectively, our data demonstrate intestinal mucosal B cell repertoire establishment from a circulating pool, a process that continues for years without evidence of establishment of a stable mucosal B cell repertoire.

Identifiers

PMID38014202
PMCPMC10680888
OpenAlexW4388769381

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.