Evidence map›Paper›PMID 38012152›Full record

ArticleNature communications2023

Sis2 regulates yeast replicative lifespan in a dose-dependent manner.

Tolga T Ölmez, David F Moreno, Ping Liu, Zane M Johnson, Madeline M McGinnis, Benjamin P Tu, Mark Hochstrasser, Murat Acar

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Cell membrane asymmetries and cellular aging.The Biochemical journal · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tolga T Ölmez *Department of Molecular Cellular and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT, 06511, USA.ORCID 0000-0002-8818-4507
David F Moreno *Department of Molecular Cellular and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT, 06511, USA.ORCID 0000-0002-7417-8050
Ping Liu *Department of Molecular Cellular and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT, 06511, USA.
Zane M JohnsonDepartment of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, CT, 06520, USA.ORCID 0000-0002-9497-8100
Madeline M McGinnisDepartment of Biochemistry, UT Southwestern Medical Center, Dallas, TX, 75390, USA.ORCID 0000-0001-7168-0451
Benjamin P TuDepartment of Biochemistry, UT Southwestern Medical Center, Dallas, TX, 75390, USA.ORCID 0000-0001-5545-9183
Mark HochstrasserDepartment of Molecular Cellular and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT, 06511, USA.ORCID 0000-0002-1131-5484
Murat AcarDepartment of Molecular Cellular and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT, 06511, USA. macar@ku.edu.tr.ORCID 0000-0003-3289-8751

Funding

Mechanisms of Cell Regulation and Manipulation by the Ubiquitin SystemR35GM136325 · NIGMS · YALE UNIVERSITY · PI Mark W Hochstrasser · 2020 to 2026
$6.5M
Metabolic signals regulating cell growth versus survivalR35GM136370 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Benjamin P Tu · 2020 to 2026
$2.8M
Microfluids-enabled Quantitative Systems Biology Approaches to Construct Gene Networks Regulating Yeast Lifespan and Genetic Noise Dynamics During AgingR01GM127870 · NIGMS · YALE UNIVERSITY · PI ACAR, MURAT · 2018 to 2022
$1.5M
NIGMS NIH HHS R01 GM127870NIGMS NIH HHS R35 GM136325NIGMS NIH HHS R35 GM136370
6 · The paper itself

Abstract

Application of microfluidic platforms facilitated high-precision measurements of yeast replicative lifespan (RLS); however, comparative quantification of lifespan across strain libraries has been missing. Here we microfluidically measure the RLS of 307 yeast strains, each deleted for a single gene. Despite previous reports of extended lifespan in these strains, we found that 56% of them did not actually live longer than the wild-type; while the remaining 44% showed extended lifespans, the degree of extension was often different from what was previously reported. Deletion of SIS2 gene led to the largest RLS increase observed. Sis2 regulated yeast lifespan in a dose-dependent manner, implying a role for the coenzyme A biosynthesis pathway in lifespan regulation. Introduction of the human PPCDC gene in the sis2Δ background neutralized the lifespan extension. RNA-seq experiments revealed transcriptional increases in cell-cycle machinery components in sis2Δ background. High-precision lifespan measurement will be essential to elucidate the gene network governing lifespan.

Indexed as

Cell Cycle ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell CycleDNA ReplicationLongevityCell Cycle ProteinsSaccharomyces cerevisiae ProteinsSIS2 protein, S cerevisiae

Identifiers

PMID38012152
PMCPMC10682402

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.