Evidence map›Paper›PMID 38012130›Full record

ArticleNature communications2023

Time-resolved proteomic profiling reveals compositional and functional transitions across the stress granule life cycle.

Shuyao Hu, Yufeng Zhang, Qianqian Yi, Cuiwei Yang, Yanfen Liu, Yun Bai

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Review
  2. Article
  3. Prion-Like Protein LENG8-Mediated Nucleation Drives Stress Granule Assembly.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  10. Review
  11. Review
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  13. Dynamic translocation of Inside-Out proteins to the cell surface underlies cellular adaptation to cancer-induced stress.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  14. Cytoplasmic circular dsDNA is a key constituent of stress granules.bioRxiv : the preprint server for biology · 2026
    Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shuyao HuSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China. hushy@shanghaitech.edu.cn.ORCID 0000-0001-6584-2047
Yufeng ZhangSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China.
Qianqian YiSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China.
Cuiwei YangSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China.
Yanfen LiuSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China. liuyf@shanghaitech.edu.cn.ORCID 0000-0002-1192-8328
Yun BaiSchool of Life Science and Technology, ShanghaiTech University, 201210, Shanghai, China. ybai@shanghaitech.edu.cn.ORCID 0000-0002-5441-9777

Funding

Ministry of Science and Technology of the People's Republic of China (Chinese Ministry of Science and Technology) 2016YFA0500901National Natural Science Foundation of China (National Science Foundation of China) 31670756National Natural Science Foundation of China (National Science Foundation of China) 32070697
6 · The paper itself

Abstract

Stress granules (SGs) are dynamic, membrane-less organelles. With their formation and disassembly processes characterized, it remains elusive how compositional transitions are coordinated during prolonged stress to meet changing functional needs. Here, using time-resolved proteomic profiling of the acute to prolonged heat-shock SG life cycle, we identify dynamic SG proteins, further segregated into early and late proteins. Comparison of different groups of SG proteins suggests that their biochemical properties help coordinate SG compositional and functional transitions. In particular, early proteins, with high phase-separation-propensity, drive the rapid formation of the initial SG platform, while late proteins are subsequently recruited as discrete modules to further functionalize SGs. This model, supported by immunoblotting and immunofluorescence imaging, provides a conceptual framework for the compositional transitions throughout the acute to prolonged SG life cycle. Additionally, an early SG constituent, non-muscle myosin II, is shown to promote SG formation by increasing SG fusion, underscoring the strength of this dataset in revealing the complexity of SG regulation.

Indexed as

Cytoplasmic GranulesProteomicsStress GranulesStress, Physiological

Identifiers

PMID38012130
PMCPMC10682001

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.