Evidence map›Paper›PMID 38011567›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Peripheral blood TCR clonotype diversity as an age-associated marker of breast cancer progression.

Jun Nishida, Simona Cristea, Sudheshna Bodapati, Julieann Puleo, Gali Bai, Ashka Patel, Melissa Hughes, Craig Snow, Virginia Borges, Kathryn J Ruddy and 9 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Personalised graded psychological intervention on negative emotion and quality of life in patients with breast cancer.Technology and health care : official journal of the European Society for Engineering and Medicine · 2024
    Trial
  2. Breast cancer prevention by prophylactic Lalba mRNA-LNP vaccination.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Ageing, immune fitness and cancer.Nature reviews. Cancer · 2025
    Review
  5. Article
  6. Review
  7. Peripheral blood TCR clonotype diversity as an age-associated marker of breast cancer progression.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 1 country.

Jun Nishida *Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Simona Cristea *Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215.
Sudheshna Bodapati *Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215.
Julieann PuleoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.ORCID 0000-0002-4515-4252
Gali BaiDepartment of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215.
Ashka PatelDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Melissa HughesDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Craig SnowDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Virginia BorgesMedicine-Medical Oncology, University of Colorado Comprehensive Cancer Center, Aurora, CO 80045.
Kathryn J RuddyDivision of Medical Oncology, Department of Oncology, Mayo Clinic, Rochester, MN 55905.
Laura C CollinsDepartment of Pathology, Beth Israel Deaconess Medical Center, Boston, MA 02115.
Anne-Marie FeeneyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Kara SlowikThe Broad Institute of MIT and Harvard, Cambridge, MA 02138.
Veerle BossuytMass General Pathology, Massachusetts General Hospital, Boston, MA 02114.
Deborah DillonDepartment of Pathology, Brigham and Women's Hospital, Boston, MA 02115.
Nancy U LinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Ann H PartridgeDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.
Franziska MichorDepartment of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215.
Kornelia PolyakDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215.ORCID 0000-0002-5964-0382
Brigham and Women's Hospital · USBroad Institute · USHarvard University · USBeth Israel Deaconess Medical Center · USDana-Farber Cancer Institute · USMassachusetts General Hospital · USMayo Clinic in Arizona · USUniversity of Colorado Cancer Center · US

Funding

Tissue and Pathology CoreP50CA168504 · NCI · DANA-FARBER CANCER INST · PI Nabihah Tayob · 2013 to 2026
$30.1M
Targeting intratumor heterogeneity in breast cancerR35CA197623 · NCI · DANA-FARBER CANCER INST · PI KORNELIA POLYAK · 2015 to 2026
$12.4M
NCI NIH HHS P50 CA168504NCI NIH HHS R35 CA197623NCI NIH HHS U24 CA224613
6 · The paper itself

Abstract

Immune escape is a prerequisite for tumor growth. We previously described a decline in intratumor activated cytotoxic T cells and T cell receptor (TCR) clonotype diversity in invasive breast carcinomas compared to ductal carcinoma in situ (DCIS), implying a central role of decreasing T cell responses in tumor progression. To determine potential associations between peripheral immunity and breast tumor progression, here, we assessed the peripheral blood TCR clonotype of 485 breast cancer patients diagnosed with either DCIS or de novo stage IV disease at younger (<45) or older (≥45) age. TCR clonotype diversity was significantly lower in older compared to younger breast cancer patients regardless of tumor stage at diagnosis. In the younger age group, TCR-α clonotype diversity was lower in patients diagnosed with de novo stage IV breast cancer compared to those diagnosed with DCIS. In the older age group, DCIS patients with higher TCR-α clonotype diversity were more likely to have a recurrence compared to those with lower diversity. Whole blood transcriptome profiles were distinct depending on the TCR-α Chao1 diversity score. There were more CD8

Indexed as

Breast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, Intraductal, NoninfiltratingAgedBiomarkers, TumorCD8-Positive T-LymphocytesFemaleHumansNeoplastic ProcessesReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaBiomarkers, TumorReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betabreast cancerDCISdiversityTCR clonotype

Identifiers

PMID38011567
PMCPMC10710020
OpenAlexW4389040436

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.