Evidence map›Paper›PMID 38011564›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Epigenetic switch reshapes epithelial progenitor cell signatures and drives inflammatory pathogenesis in hidradenitis suppurativa.

Lin Jin, Yunjia Chen, Suhail Muzaffar, Chao Li, Carlos A Mier-Aguilar, Jasim Khan, Mahendra P Kashyap, Shanrun Liu, Ritesh Srivastava, Jessy S Deshane and 6 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  5. Distinct and shared effects of individual γ-secretase inhibitors on human keratinocytes.JID innovations : skin science from molecules to population health · 2026
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  18. CD2 expressing innate lymphoid and T cells are critical effectors of immunopathogenesis in hidradenitis suppurativa.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  19. Article
  20. Tissue comparability and bias in hidradenitis suppurativa transcriptomic studies.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Lin JinCenter for Epigenomics and Translational Research in Inflammatory Skin Diseases, Department of Dermatology, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-6590-8755
Yunjia ChenDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL 35294.
Suhail MuzaffarDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-5199-0647
Chao LiDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, AL 35294.
Carlos A Mier-AguilarDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0002-5871-0262
Jasim KhanDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-6067-8516
Mahendra P KashyapDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.
Shanrun LiuInstitutional Research Core Program, Flow Cytometry and Singe Cell Core, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0002-7201-4212
Ritesh SrivastavaDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.
Jessy S DeshaneDivision of Pulmonary, Allergy and Critical Care Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.
Tim M TownesDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, AL 35294.
Boni E ElewskiDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0002-1475-2874
Craig A ElmetsDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-7131-4697
David K CrossmanDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0002-0981-169X
Chander RamanDepartment of Dermatology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-7775-9988
Mohammad AtharCenter for Epigenomics and Translational Research in Inflammatory Skin Diseases, Department of Dermatology, University of Alabama at Birmingham, Birmingham, AL 35294.ORCID 0000-0001-5829-7992
University of Alabama at Birmingham · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Omer Jamy · 1985 to 2026
$165.9M
RXR Rexinoids for Cancer ChemopreventionP01CA210946 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ATHAR, MOHAMMAD · 2017 to 2021
$7.3M
Project 5 Nano-micro Hybrid Fibrous Materials for Containment Removal and Site RemediationP42ES027723 · NIEHS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LUNGU, CLAUDIU T · 2020 to 2024
$6.7M
Chemoprevention of environmental UVB-induced skin cancer in immunosuppressed miceR01ES026219 · NIEHS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ATHAR, MOHAMMAD · 2016 to 2020
$1.7M
NCI NIH HHS P01 CA210946NCI NIH HHS P30 CA013148NIEHS NIH HHS P42 ES027723NIEHS NIH HHS R01 ES026219
6 · The paper itself

Abstract

Hidradenitis suppurativa (HS) is a complex inflammatory skin disease with undefined mechanistic underpinnings. Here, we investigated HS epithelial cells and demonstrated that HS basal progenitors modulate their lineage restriction and give rise to pathogenic keratinocyte clones, resulting in epidermal hyperproliferation and dysregulated inflammation in HS. When comparing to healthy epithelial stem/progenitor cells, in HS, we identified changes in gene signatures that revolve around the mitotic cell cycle, DNA damage response and repair, as well as cell-cell adhesion and chromatin remodeling. By reconstructing cell differentiation trajectory and CellChat modeling, we identified a keratinocyte population specific to HS. This population is marked by

Indexed as

Hidradenitis SuppurativaChromatinEpigenesis, GeneticEpigenomicsHumansSkinStem CellsChromatinepigenetic regulationhidradenitis suppurativaIRF3S100A family genesskin epithelial cell

Identifiers

PMID38011564
PMCPMC10710069
OpenAlexW4389040491

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.