Evidence map›Paper›PMID 38007442›Full record

ArticleParasites & vectors2023

Development and evaluation of specific polymerase chain reaction assays for detecting Theileria equi genotypes.

Believe Ahedor, Davaajav Otgonsuren, Atambekova Zhyldyz, Azirwan Guswanto, Noel Muthoni Mumbi Ngigi, Maria Fátima Rodríguez Valinotti, Hemal Kothalawala, Nizanantha Kalaichelvan, Seekkuge Susil Priyantha Silva, Hemali Kothalawala and 3 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  4. Molecular detection and genotyping ofIranian journal of veterinary research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Believe AhedorNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Davaajav OtgonsurenNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Atambekova ZhyldyzNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Azirwan GuswantoNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Noel Muthoni Mumbi NgigiNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Maria Fátima Rodríguez ValinottiCentro de Diagnostico Veterinario, San Lorenzo, Paraguay.
Hemal KothalawalaVeterinary Research Institute, Peradeniya, Sri Lanka.
Nizanantha KalaichelvanDepartment of Farm Animal Production and Health, Faculty of Veterinary Medicine and Animal Science, University of Peradeniya, Peradeniya, Sri Lanka.
Seekkuge Susil Priyantha SilvaDepartment of Animal Production and Health, Peradeniya, Sri Lanka.
Hemali KothalawalaDepartment of Animal Production and Health, Peradeniya, Sri Lanka.
Tomás Javier AcostaUniversidad Nacional de Canendiyu, Salto del Guaira, Paraguay.
Thillaiampalam SivakumarNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan.
Naoaki YokoyamaNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-Cho, Obihiro, Hokkaido, 080-8555, Japan. yokoyama@obihiro.ac.jp.
Obihiro University of Agriculture and Veterinary Medicine · JPVeterinary Research Institute · LKUniversity of Peradeniya · LK

Funding

Japan Society for the Promotion of Science 22H02511Japan Society for the Promotion of Science 22KK0095Japan Society for the Promotion of Science Open Partnership Joint Project of the JSPS Bilateral Joint Research Projects (PJSBP120229902)
6 · The paper itself

Abstract

backgroundTheileria equi causes equine piroplasmosis, an economically significant disease that affects horses and other equids worldwide. Based on 18S ribosomal RNA (18S rRNA sequences), T. equi can be classified into five genotypes: A, B, C, D, and E. These genotypes have implications for disease management and control. However, no conventional polymerase chain reaction (PCR) assays are available to differentiate the genotypes of T. equi. To overcome this limitation, we developed and evaluated PCR assays specific for the detection of each T. equi genotype.

methodsA pair of forward and reverse primers, specifically targeting the 18S rRNA sequence of each genotype, was designed. The genotype-specific PCR assays were evaluated for their specificity using plasmids containing inserts of the 18S rRNA sequence of each genotype. Subsequently, the assays were tested on 270 T. equi-positive equine blood DNA samples (92 from donkeys in Sri Lanka and 178 from horses in Paraguay). 18S rRNA sequences derived from the PCR amplicons were analyzed phylogenetically.

resultsEach genotype-specific PCR assay accurately targeted the intended genotype, and did not produce any amplicons when 18S rRNA from other T. equi genotypes or genomic DNA of Babesia caballi or uninfected horse blood was used as the template. Previous studies employing PCR sequencing methods identified T. equi genotypes C and D in the Sri Lankan samples, and genotypes A and C in the Paraguayan samples. In contrast, our PCR assay demonstrated exceptional sensitivity by detecting four genotypes (A, C, D, and E) in the Sri Lankan samples and all five genotypes in the Paraguayan samples. All the Sri Lankan samples and 93.3% of the Paraguayan samples tested positive for at least one genotype, further emphasizing the sensitivity of our assays. The PCR assays also had the ability to detect co-infections, where multiple genotypes in various combinations were detected in 90.2% and 22.5% of the Sri Lankan and Paraguayan samples, respectively. Furthermore, the sequences obtained from PCR amplicons clustered in the respective phylogenetic clades for each genotype, validating the specificity of our genotype-specific PCR assays.

conclusionsThe genotype-specific PCR assays developed in the present study are reliable tools for the differential detection of T. equi genotypes.

Indexed as

BabesiosisCattle DiseasesHorse DiseasesTheileriaTheileriasisAnimalsCattleDNA, ProtozoanEquidaeGenotypeHorsesPhylogenyPolymerase Chain ReactionRNA, Ribosomal, 18SDNA, ProtozoanRNA, Ribosomal, 18SEquine piroplasmosisGenotypePolymerase chain reactionSpecificityTheileria equi

Identifiers

PMID38007442
PMCPMC10675911
OpenAlexW4388998578

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.