Evidence map›Paper›PMID 38005950›Full record

ArticleViruses2023

Challenges for Precise Subtyping and Sequencing of a H5N1 Clade 2.3.4.4b Highly Pathogenic Avian Influenza Virus Isolated in Japan in the 2022-2023 Season Using Classical Serological and Molecular Methods.

James G Komu, Hiep Dinh Nguyen, Yohei Takeda, Shinya Fukumoto, Kunitoshi Imai, Hitoshi Takemae, Tetsuya Mizutani, Haruko Ogawa

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

James G KomuGraduate School of Animal and Veterinary Sciences and Agriculture, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.ORCID 0000-0001-5875-8285
Hiep Dinh NguyenGraduate School of Animal and Veterinary Sciences and Agriculture, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.
Yohei TakedaDepartment of Veterinary Medicine, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.ORCID 0000-0003-1319-2198
Shinya FukumotoDepartment of Veterinary Medicine, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.
Kunitoshi ImaiDepartment of Veterinary Medicine, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.
Hitoshi TakemaeCenter for Infectious Diseases Epidemiology and Prevention Research, CEPiR, Tokyo University of Agriculture and Technology, Fuchu-shi 183-8509, Tokyo, Japan.ORCID 0000-0003-3003-970X
Tetsuya MizutaniCenter for Infectious Diseases Epidemiology and Prevention Research, CEPiR, Tokyo University of Agriculture and Technology, Fuchu-shi 183-8509, Tokyo, Japan.
Haruko OgawaDepartment of Veterinary Medicine, Obihiro University of Agriculture and Veterinary Medicine, 2-11 Inada, Obihiro 080-8555, Hokkaido, Japan.ORCID 0000-0001-5889-499X
Obihiro University of Agriculture and Veterinary Medicine · JPTokyo University of Agriculture and Technology · JPJomo Kenyatta University of Agriculture and Technology · KE

Funding

Japan Society for the Promotion of Science 20KK0224b
6 · The paper itself

Abstract

The continuous evolution of H5Nx highly pathogenic avian influenza viruses (HPAIVs) is a major concern for accurate diagnosis. We encountered some challenges in subtyping and sequencing a recently isolated H5N1 HPAIV strain using classical diagnostic methods. Oropharyngeal, conjunctival, and cloacal swabs collected from a dead white-tailed eagle (

Indexed as

Influenza A virusInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsAnimalsBirdsHemagglutinin Glycoproteins, Influenza VirusHemagglutininsJapanSeasonsHemagglutinin Glycoproteins, Influenza VirusHemagglutininsantigenic and genetic evolutionclassical diagnostic methodsH5N1highly pathogenic avian influenza

Identifiers

PMID38005950
PMCPMC10675786
OpenAlexW4388832341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.