Evidence map›Paper›PMID 38005843›Full record

ArticleViruses2023

Spike Gene Analysis and Prevalence of Porcine Epidemic Diarrhea Virus from Pigs in South Korea: 2013-2022.

Gyu-Nam Park, Sok Song, SeEun Choe, Jihye Shin, Byung-Hyun An, Song-Yi Kim, Bang-Hun Hyun, Dong-Jun An

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Journal of virology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gyu-Nam ParkVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
Sok SongVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
SeEun ChoeVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
Jihye ShinVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
Byung-Hyun AnCollege of Veterinary Medicine, Seoul University, Gwanak-ro, Gwanak-gu, Seoul 08826, Republic of Korea.
Song-Yi KimVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
Bang-Hun HyunVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.
Dong-Jun AnVirus Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Republic of Korea.ORCID 0000-0002-5690-4039
Animal and Plant Quarantine Agency · KR

Funding

Animal and Plant Quarantine Agency M-1543083-2022-23-02
6 · The paper itself

Abstract

From late 2013-2022, 1131 cases of porcine epidemic diarrhea (PED) were reported to the Korean Animal Health Integrated System (KAHIS). There were four major outbreaks from winter to spring (2013-2014, 2017-2018, 2018-2019, and 2021-2022), with the main outbreaks occurring in Chungnam (CN), Jeonbuk (JB), and Jeju (JJ). Analysis of the complete spike (S) gene of 140/1131 KAHIS PEDV cases nationwide confirmed that 139 belonged to the G2b genotype and 1 to the G2a genotype. Among them, two strains (K17GG1 and K17GB3) were similar to an S INDEL isolated in the United States (strain OH851), and 12 strains had deletions (nucleotides (nt) 3-99) or insertions (12 nt) within the S gene. PEDVs in JJ formed a regionally independent cluster. The substitution rates (substitutions/site/year) were as follows: 1.5952 × 10

Indexed as

Coronavirus InfectionsPorcine epidemic diarrhea virusSwine DiseasesAnimalsBayes TheoremDiarrheaPhylogenyPrevalenceRepublic of KoreaSpike Glycoprotein, CoronavirusSwineUnited StatesSpike Glycoprotein, CoronavirusdiarrheaevolutionPEDVpigletS INDELspike

Identifiers

PMID38005843
PMCPMC10674705
OpenAlexW4388023916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.