Evidence map›Paper›PMID 38003577›Full record

ArticleInternational journal of molecular sciences2023

Whole-Transcriptome RNA Sequencing Uncovers the Global Expression Changes and RNA Regulatory Networks in Duck Embryonic Myogenesis.

Shuibing Liu, Jintao Wu, Wentao Zhang, Hongxia Jiang, Yanan Zhou, Jing Liu, Huirong Mao, Sanfeng Liu, Biao Chen

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Shuibing LiuCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Jintao WuCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Wentao ZhangCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Hongxia JiangCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Yanan ZhouCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Jing LiuCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Huirong MaoCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Sanfeng LiuCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Biao ChenCollege of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.ORCID 0000-0003-1852-5289
Poultry Research Institute · CN

Funding

National Natural Science Foundation of China 32102541Natural Science Foundation of Jiangxi Province 20212BAB215016the Technology System of Modern Agricultural Poultry Industry of Jiangxi Province JXARS-09
6 · The paper itself

Abstract

Duck meat is pivotal in providing high-quality protein for human nutrition, underscoring the importance of studying duck myogenesis. The regulatory mechanisms governing duck myogenesis involve both coding and non-coding RNAs, yet their specific expression patterns and molecular mechanisms remain elusive. To address this knowledge gap, we performed expression profiling analyses of mRNAs, lncRNAs, circRNAs, and miRNAs involved in duck myogenesis using whole-transcriptome RNA-seq. Our analysis identified 1733 differentially expressed (DE)-mRNAs, 1116 DE-lncRNAs, 54 DE-circRNAs, and 174 DE-miRNAs when comparing myoblasts and myotubes. A GO analysis highlighted the enrichment of DE molecules in the extracellular region, protein binding, and exocyst. A KEGG analysis pinpointed pathways related to ferroptosis, PPAR signaling, nitrogen metabolism, cell cycle, cardiac muscle contraction, glycerolipid metabolism, and actin cytoskeleton. A total of 51 trans-acting lncRNAs, including

Indexed as

MicroRNAsRNA, Long NoncodingAnimalsDucksGene Expression ProfilingGene Regulatory NetworksHumansMuscle DevelopmentRNA, CircularRNA, MessengerRNA-SeqTranscriptomeMicroRNAsMirn129 microRNA, humanRNA, CircularRNA, Long NoncodingRNA, MessengerceRNA regulatory networkduck myogenesisnon-coding RNAswhole-transcriptome sequencing

Identifiers

PMID38003577
PMCPMC10671564
OpenAlexW4388725766

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.