Evidence map›Paper›PMID 38002404›Full record

ArticleBioengineering (Basel, Switzerland)2023

Pixel Diffuser: Practical Interactive Medical Image Segmentation without Ground Truth.

Mingeon Ju, Jaewoo Yang, Jaeyoung Lee, Moonhyun Lee, Junyung Ji, Younghoon Kim

Abstract read
In one paragraph

Article in Bioengineering (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Mingeon JuMajor in Bio Artificial Intelligence, Department of Applied Artificial Intelligence, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0009-0004-5453-3731
Jaewoo YangMajor in Bio Artificial Intelligence, Department of Applied Artificial Intelligence, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0000-0002-7687-026X
Jaeyoung LeeMajor in Bio Artificial Intelligence, Department of Applied Artificial Intelligence, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0000-0001-8023-0081
Moonhyun LeeMajor in Bio Artificial Intelligence, Department of Computer Science & Engineering, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0009-0006-0598-9956
Junyung JiMajor in Bio Artificial Intelligence, Department of Applied Artificial Intelligence, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0000-0003-4587-4337
Younghoon KimMajor in Bio Artificial Intelligence, Department of Applied Artificial Intelligence, Hanyang University at Ansan, Ansan 15588, Republic of Korea.ORCID 0000-0002-3049-035X

Funding

Institute of Information & Communications Technology Planning & Evaluation (IITP) RS-2022-00155885Ministry of Trade, Industry and Energy (MOTIE) and Korea Institute for Advancement of Technology (KIAT) P0025661
6 · The paper itself

Abstract

Medical image segmentation is essential for doctors to diagnose diseases and manage patient status. While deep learning has demonstrated potential in addressing segmentation challenges within the medical domain, obtaining a substantial amount of data with accurate ground truth for training high-performance segmentation models is both time-consuming and demands careful attention. While interactive segmentation methods can reduce the costs of acquiring segmentation labels for training supervised models, they often still necessitate considerable amounts of ground truth data. Moreover, achieving precise segmentation during the refinement phase results in increased interactions. In this work, we propose an interactive medical segmentation method called PixelDiffuser that requires no medical segmentation ground truth data and only a few clicks to obtain high-quality segmentation using a VGG19-based autoencoder. As the name suggests, PixelDiffuser starts with a small area upon the initial click and gradually detects the target segmentation region. Specifically, we segment the image by creating a distortion in the image and repeating it during the process of encoding and decoding the image through an autoencoder. Consequently, PixelDiffuser enables the user to click a part of the organ they wish to segment, allowing the segmented region to expand to nearby areas with pixel values similar to the chosen organ. To evaluate the performance of PixelDiffuser, we employed the dice score, based on the number of clicks, to compare the ground truth image with the inferred segment. For validation of our method's performance, we leveraged the BTCV dataset, containing CT images of various organs, and the CHAOS dataset, which encompasses both CT and MRI images of the liver, kidneys and spleen. Our proposed model is an efficient and effective tool for medical image segmentation, achieving competitive performance compared to previous work in less than five clicks and with very low memory consumption without additional training.

Indexed as

autoencoderCT segmentationinteractive medical segmentationiterative segmentationreconstruction noise

Identifiers

PMID38002404
PMCPMC10669538

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.