Evidence map›Paper›PMID 38001438›Full record

ArticleBMC genomics2023

Genomic and transcriptomic survey of bryozoan Hox and ParaHox genes with emphasis on phylactolaemate bryozoans.

Ahmed J Saadi, André Luiz de Oliveira, Kevin M Kocot, Thomas Schwaha

Abstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. ParaHox Genes Revisited: From Gut Patterning to Integrated Axial and Neural Organization in Rotifera.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2026
    Article
  3. Article
  4. The genome sequence of the ruby bryozoan,Wellcome open research · 2024
    Article
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Ahmed J SaadiDepartment of Evolutionary Biology, Unit for Integrative Zoology, University of Vienna, Schlachthausgasse 43, Vienna, A-1030, Austria. ahmed.saadi@univie.ac.at.
André Luiz de OliveiraDepartment of Symbiosis, Max-Planck-Institute for Marine Microbiology, Celsiustraße,1, D-28359, Bremen, Germany.
Kevin M KocotDepartment of Biological Sciences and Alabama Museum of Natural History, University of Alabama, Tuscaloosa, Alabama, 35487, USA.
Thomas SchwahaDepartment of Evolutionary Biology, Unit for Integrative Zoology, University of Vienna, Schlachthausgasse 43, Vienna, A-1030, Austria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBryozoans are mostly sessile aquatic colonial invertebrates belonging to the clade Lophotrochozoa, which unites many protostome bilaterian phyla such as molluscs, annelids and brachiopods. While Hox and ParaHox genes have been extensively studied in various lophotrochozoan lineages, investigations on Hox and ParaHox gene complements in bryozoans are scarce.

resultsHerein, we present the most comprehensive survey of Hox and ParaHox gene complements in bryozoans using four genomes and 35 transcriptomes representing all bryozoan clades: Cheilostomata, Ctenostomata, Cyclostomata and Phylactolaemata. Using similarity searches, phylogenetic analyses and detailed manual curation, we have identified five Hox genes in bryozoans (pb, Dfd, Lox5, Lox4 and Post2) and one ParaHox gene (Cdx). Interestingly, we observed lineage-specific duplication of certain Hox and ParaHox genes (Dfd, Lox5 and Cdx) in some bryozoan lineages.

conclusionsThe bryozoan Hox cluster does not retain the ancestral lophotrochozoan condition but appears relatively simple (includes only five genes) and broken into two genomic regions, characterized by the loss and duplication of serval genes. Importantly, bryozoans share the lack of two Hox genes (Post1 and Scr) with their proposed sister-taxon, Phoronida, which suggests that those genes were missing in the most common ancestor of bryozoans and phoronids.

Indexed as

Homeodomain ProteinsTranscriptomeAnimalsGenes, HomeoboxGenomicsInvertebratesPhylogenyHomeodomain ProteinsBryozoansComparative genomic and transcriptomicGene duplicationHox and ParaHox genesPhylactolaemate

Identifiers

PMID38001438
PMCPMC10675955

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