Evidence map›Paper›PMID 38001396›Full record

ArticleChromosoma2023

Karyotypes of water frogs from the Pelophylax esculentus complex: results of cross-species chromosomal painting.

Dmitrij Dedukh, Antonina Maslova, Ahmed Al-Rikabi, Niklas Padutsch, Thomas Liehr, Alla Krasikova

Abstract read
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In one paragraph

Article in Chromosoma, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Dmitrij DedukhLaboratory of Cell Nucleus Structure and Dynamics, Saint-Petersburg State University, Saint-Petersburg, Russia.
Antonina MaslovaLaboratory of Cell Nucleus Structure and Dynamics, Saint-Petersburg State University, Saint-Petersburg, Russia.
Ahmed Al-RikabiJena University Hospital, Institute of Human Genetics, Friedrich Schiller University, Jena, Germany.
Niklas PadutschJena University Hospital, Institute of Human Genetics, Friedrich Schiller University, Jena, Germany.
Thomas LiehrJena University Hospital, Institute of Human Genetics, Friedrich Schiller University, Jena, Germany.
Alla KrasikovaLaboratory of Cell Nucleus Structure and Dynamics, Saint-Petersburg State University, Saint-Petersburg, Russia. alla.krasikova@gmail.com.
Friedrich Schiller University Jena · DESt Petersburg University · RUCzech Academy of Sciences, Institute of Animal Physiology and Genetics · CZJena University Hospital · DE

Funding

Grantová Agentura České Republiky 23-07028KRussian Science Foundation 20-74-00030RVO 67985904
6 · The paper itself

Abstract

Amphibian species have the largest genome size enriched with repetitive sequences and relatively similar karyotypes. Moreover, many amphibian species frequently hybridize causing nuclear and mitochondrial genome introgressions. In addition, hybridization in some amphibian species may lead to clonality and polyploidization. All such events were found in water frogs from the genus Pelophylax. Among the species within the genus Pelophylax, P. esculentus complex is the most widely distributed and well-studied. This complex includes two parental species, P. ridibundus and P. lessonae, and their hybrids, P. esculentus, reproducing hemiclonally. Parental species and their hybrids have similar but slightly polymorphic karyotypes, so their precise identification is still required. Here, we have developed a complete set of 13 chromosome painting probes for two parental species allowing the precise identification of all chromosomes. Applying chromosomal painting, we identified homologous chromosomes in both parental species and orthologous chromosomes in their diploid hemiclonal hybrids. Comparative painting did not reveal interchromosomal exchanges between the studied water frog species and their hybrids. Using cross-specific chromosome painting, we detected unequal distribution of the signals along chromosomes suggesting the presence of species-specific tandem repeats. Application of chromosomal paints to the karyotypes of hybrids revealed differences in the intensity of staining for P. ridibundus and P. lessonae chromosomes. Thus, both parental genomes have a divergence in unique sequences. Obtained chromosome probes may serve as a powerful tool to unravel chromosomal evolution in phylogenetically related species, identify individual chromosomes in different cell types, and investigate the elimination of chromosomes in hybrid water frogs.

Indexed as

Chromosome PaintingRanidaeAnimalsAnuraKaryotypeKaryotypingRana esculentaChromosomal paintingChromosome evolutionClonal hybridsCytogeneticsFluorescence in situ hybridizationPelophylax esculentus complex

Identifiers

PMID38001396
OpenAlexW4389001731

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.