Evidence map›Paper›PMID 38001233›Full record

ArticleCommunications biology2023

The Rauvolfia tetraphylla genome suggests multiple distinct biosynthetic routes for yohimbane monoterpene indole alkaloids.

Emily Amor Stander, Beata Lehka, Inês Carqueijeiro, Clément Cuello, Frederik G Hansson, Hans J Jansen, Thomas Dugé De Bernonville, Caroline Birer Williams, Valentin Vergès, Enzo Lezin and 13 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
9.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Tuning reductase activity in monoterpene indole alkaloid biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  13. Genome-based discovery of pachysiphine synthases in Tabernaemontana elegans.The Plant journal : for cell and molecular biology · 2024
    Article
  14. Review
  15. Cutting-edge plant natural product pathway elucidation.Current opinion in biotechnology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 5 countries.

Emily Amor Stander *Biomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Beata Lehka *Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kgs, Lyngby, Denmark.
Inês Carqueijeiro *Biomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.ORCID 0000-0001-9576-5556
Clément Cuello *Biomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.ORCID 0000-0002-5901-9748
Frederik G Hansson *Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kgs, Lyngby, Denmark.
Hans J JansenFuture Genomics Technologies, 2333 BE, Leiden, The Netherlands.ORCID 0000-0002-8563-4146
Thomas Dugé De BernonvilleBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Caroline Birer WilliamsBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Valentin VergèsBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Enzo LezinBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Marcus Daniel Brandbjerg Bohn LorensenDepartment of Pharmacy, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100, Copenhagen, Denmark.
Thu-Thuy DangDepartment of Chemistry, Irving K. Barber Faculty of Science, University of British Columbia, Kelowna, BC, Canada.ORCID 0000-0002-6459-3664
Audrey OudinBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Arnaud LanoueBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Mickael DurandBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.ORCID 0000-0003-4843-6383
Nathalie Giglioli-Guivarc'hBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France.
Christian JanfeltDepartment of Pharmacy, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100, Copenhagen, Denmark.
Nicolas PaponUniv Angers, Univ Brest, IRF, SFR ICAT, F-49000, Angers, France.
Ron P DirksFuture Genomics Technologies, 2333 BE, Leiden, The Netherlands.
Sarah Ellen O'connorDepartment of Natural Product Biosynthesis, Max Planck Institute for Chemical Ecology, Jena, 07745, Germany. oconnor@ice.mpg.de.ORCID 0000-0003-0356-6213
Michael Krogh JensenNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kgs, Lyngby, Denmark. mije@dtu.dk.ORCID 0000-0001-7574-4707
Sébastien BesseauBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France. sebastien.besseau@univ-tours.fr.ORCID 0000-0002-5518-2580
Vincent CourdavaultBiomolécules et Biotechnologies Végétales, EA2106, Université de Tours, 37200, Tours, France. vincent.courdavault@univ-tours.fr.ORCID 0000-0001-8902-4532
Université de Tours · FRNovo Nordisk Foundation · DKCancer Genomics Centre · NLUniversity of Copenhagen · DKMax Planck Institute for Chemical Ecology · DEUniversité de Bretagne Occidentale · FRUniversity of British Columbia · CA

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 European Institute of Innovation and Technology (H2020 The European Institute of Innovation and Technology) 814645
6 · The paper itself

Abstract

Monoterpene indole alkaloids (MIAs) are a structurally diverse family of specialized metabolites mainly produced in Gentianales to cope with environmental challenges. Due to their pharmacological properties, the biosynthetic modalities of several MIA types have been elucidated but not that of the yohimbanes. Here, we combine metabolomics, proteomics, transcriptomics and genome sequencing of Rauvolfia tetraphylla with machine learning to discover the unexpected multiple actors of this natural product synthesis. We identify a medium chain dehydrogenase/reductase (MDR) that produces a mixture of four diastereomers of yohimbanes including the well-known yohimbine and rauwolscine. In addition to this multifunctional yohimbane synthase (YOS), an MDR synthesizing mainly heteroyohimbanes and the short chain dehydrogenase vitrosamine synthase also display a yohimbane synthase side activity. Lastly, we establish that the combination of geissoschizine synthase with at least three other MDRs also produces a yohimbane mixture thus shedding light on the complex mechanisms evolved for the synthesis of these plant bioactives.

Indexed as

RauwolfiaIndole AlkaloidsMonoterpenesIndole AlkaloidsMonoterpenesyohimbane

Identifiers

PMID38001233
PMCPMC10673892
OpenAlexW4388978139

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.