Evidence map›Paper›PMID 38001079›Full record

ArticleNature communications2023

Identification of peptides from honeybee gut symbionts as potential antimicrobial agents against Melissococcus plutonius.

Haoyu Lang, Yuwen Liu, Huijuan Duan, Wenhao Zhang, Xiaosong Hu, Hao Zheng

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Haoyu LangCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China.ORCID 0000-0003-4983-4543
Yuwen LiuCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China.
Huijuan DuanCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China.
Wenhao ZhangCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China.
Xiaosong HuCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China.
Hao ZhengCollege of Food Science and Nutritional Engineering, China Agricultural University, 100083, Beijing, China. hao.zheng@cau.edu.cn.ORCID 0000-0003-3313-1675
China Agricultural University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32170495
6 · The paper itself

Abstract

Eusocial pollinators are crucial elements in global agriculture. The honeybees and bumblebees are associated with a simple yet host-restricted gut community, which protect the hosts against pathogen infections. Recent genome mining has led to the discovery of biosynthesis pathways of bioactive natural products mediating microbe-microbe interactions from the gut microbiota. Here, we investigate the diversity of biosynthetic gene clusters in the bee gut microbiota by analyzing 477 genomes from cultivated bacteria and metagenome-assembled genomes. We identify 744 biosynthetic gene clusters (BGCs) covering multiple chemical classes. While gene clusters for the post-translationally modified peptides are widely distributed in the bee guts, the distribution of the BGC classes varies significantly in different bee species among geographic locations, which is attributed to the strain-level variation of bee gut members in the chemical repertoire. Interestingly, we find that Gilliamella strains possessing a thiopeptide-like BGC show potent activity against the pathogenic Melissococcus plutonius. The spectrometry-guided genome mining reveals a RiPP-encoding BGC from Gilliamella with a 10 amino acid-long core peptide exhibiting antibacterial potentials. This study illustrates the widespread small-molecule-encoding BGCs in the bee gut symbionts and provides insights into the bacteria-derived natural products as potential antimicrobial agents against pathogenic infections.

Indexed as

Anti-Infective AgentsBiological ProductsAnimalsBacteriaBeesEnterococcaceaeMetagenomePeptidesAnti-Infective AgentsBiological ProductsPeptides

Identifiers

PMID38001079
PMCPMC10673953
OpenAlexW4388973388

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.