Evidence map›Paper›PMID 37996510›Full record

ArticleScientific reports2023

Multinomial machine learning identifies independent biomarkers by integrated metabolic analysis of acute coronary syndrome.

Meijiao Fu, Ruhua He, Zhihan Zhang, Fuqing Ma, Libo Shen, Yu Zhang, Mingyu Duan, Yameng Zhang, Yifan Wang, Li Zhu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Identification of novel hypertension biomarkers using explainable AI and metabolomics.Metabolomics : Official journal of the Metabolomic Society · 2024
    Article
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Meijiao FuNingxia Medical University, Yinchuan, 750004, Ningxia, China.
Ruhua HeDepartment of Cardiology, General Hospital of Ningxia Medical University, Yinchuan, 750004, Ningxia, China.
Zhihan ZhangDepartment of Cardiology, Hanzhong Central Hospital, Hanzhong, 723200, Shanxi, China.
Fuqing MaDepartment of Cardiology, The Fifth People's Hospital of Ningxia, Shizuishan, 753000, Ningxia, China.
Libo ShenCenter for Cardiovascular Diseases, People's Hospital of Ningxia Hui Autonomous Region, Yinchuan, 750002, Ningxia, China.
Yu ZhangNingxia Medical University, Yinchuan, 750004, Ningxia, China.
Mingyu DuanNingxia Medical University, Yinchuan, 750004, Ningxia, China.
Yameng ZhangDepartment of Cardiology, The Second Affiliated Hospital of Henan University of Science and Technology, Luoyang, 471000, Henan, China.
Yifan WangDepartment of Radiology, General Hospital of Ningxia Medical University, Yinchuan, 750004, Ningxia, China.
Li ZhuDepartment of Radiology, General Hospital of Ningxia Medical University, Yinchuan, 750004, Ningxia, China. zhuli72@163.com.
Jun HeDepartment of Cardiology, General Hospital of Ningxia Medical University, Yinchuan, 750004, Ningxia, China. junhe@nyfy.com.cn.
Ningxia Medical University · CNFifth Hospital of Shijiazhuang · CNHanzhong Central Hospital · CNHenan University of Science and Technology · CNNingxia Medical University General Hospital · CNThe Fourth People's Hospital of Ningxia Hui Autonomous Region · CN

Funding

Ningxia Key Research and Development Plan Project 2021BEG03115 to JHNingxia Key Research and Development Plan Project 2022BEG02025 to LZ
6 · The paper itself

Abstract

A multi-class classification model for acute coronary syndrome (ACS) remains to be constructed based on multi-fluid metabolomics. Major confounders may exert spurious effects on the relationship between metabolism and ACS. The study aims to identify an independent biomarker panel for the multiclassification of HC, UA, and AMI by integrating serum and urinary metabolomics. We performed a liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based metabolomics study on 300 serum and urine samples from 44 patients with unstable angina (UA), 77 with acute myocardial infarction (AMI), and 29 healthy controls (HC). Multinomial machine learning approaches, including multinomial adaptive least absolute shrinkage and selection operator (LASSO) regression and random forest (RF), and assessment of the confounders were applied to integrate a multi-class classification biomarker panel for HC, UA and AMI. Different metabolic landscapes were portrayed during the transition from HC to UA and then to AMI. Glycerophospholipid metabolism and arginine biosynthesis were predominant during the progression from HC to UA and then to AMI. The multiclass metabolic diagnostic model (MDM) dependent on ACS, including 2-ketobutyric acid, LysoPC(18:2(9Z,12Z)), argininosuccinic acid, and cyclic GMP, demarcated HC, UA, and AMI, providing a C-index of 0.84 (HC vs. UA), 0.98 (HC vs. AMI), and 0.89 (UA vs. AMI). The diagnostic value of MDM largely derives from the contribution of 2-ketobutyric acid, and LysoPC(18:2(9Z,12Z)) in serum. Higher 2-ketobutyric acid and cyclic GMP levels were positively correlated with ACS risk and atherosclerosis plaque burden, while LysoPC(18:2(9Z,12Z)) and argininosuccinic acid showed the reverse relationship. An independent multiclass biomarker panel for HC, UA, and AMI was constructed using the multinomial machine learning methods based on serum and urinary metabolite signatures.

Indexed as

Acute Coronary SyndromeMyocardial InfarctionAngina, UnstableArgininosuccinic AcidBiomarkersButyratesChromatography, LiquidCyclic GMPHumansTandem Mass Spectrometryalpha-ketobutyric acidArgininosuccinic AcidBiomarkersButyratesCyclic GMP

Identifiers

PMID37996510
PMCPMC10667512
OpenAlexW4388942984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.