Evidence map›Paper›PMID 37996417›Full record

ArticleNature communications2023

Molecular EPISTOP, a comprehensive multi-omic analysis of blood from Tuberous Sclerosis Complex infants age birth to two years.

Franz Huschner, Jagoda Głowacka-Walas, James D Mills, Katarzyna Klonowska, Kathryn Lasseter, John M Asara, Romina Moavero, Christoph Hertzberg, Bernhard Weschke, Kate Riney and 31 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 20 institutions in 11 countries.

Franz Huschner *Proteome Factory AG, Berlin, Germany.
Jagoda Głowacka-Walas *Transition Technologies Science, Warsaw, Poland.ORCID 0000-0002-7628-8691
James D MillsAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Katarzyna KlonowskaDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
Kathryn LasseterDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
John M AsaraDepartment of Medicine, Harvard Medical School and Division of Signal Transduction, Beth Israel Deaconess Medical Center, Boston, MA, USA.
Romina MoaveroChild Neurology and Psychiatry Unit, Systems Medicine Department, Tor Vergata University, Rome, Italy.
Christoph HertzbergDiagnose- und Behandlungszentrum für Kinder, Vivantes-Klinikum Neukölln, Berlin, Germany.
Bernhard WeschkeDepartment of Child Neurology, Charité University Medicine Berlin, Berlin, Germany.ORCID 0000-0003-4533-0743
Kate RineyNeurosciences Unit, Queensland Children's Hospital, South Brisbane, Queensland, Australia.
Martha FeuchtEpilepsy Service, Department of Pediatrics and Adolescent Medicine, Medical University of Vienna, Member of ERN EpiCARE, Vienna, Austria.
Theresa SchollEpilepsy Service, Department of Pediatrics and Adolescent Medicine, Medical University of Vienna, Member of ERN EpiCARE, Vienna, Austria.
Pavel KrsekDepartment of Paediatric Neurology, Motol University Hospital, 2nd Medical Faculty, Charles University, Prague, Czech Republic.
Rima NabboutDepartment of Pediatric Neurology, Reference Centre for Rare Epilepsies, Necker-Enfants Malades Hospital, Université Paris cité, Imagine Institute, Paris, France.
Anna C JansenNeurogenetics Research Group, Vrije Universiteit Brussel, Brussels, Belgium.
Bořivoj PetrákDepartment of Paediatric Neurology, Motol University Hospital, 2nd Medical Faculty, Charles University, Prague, Czech Republic.
Jackelien van ScheppingenAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Josef ZamecnikDepartment. of Pathology and Molecular Medicine, Motol University Hospital, 2nd Medical Faculty, Charles University, Prague, Czech Republic.
Anand IyerDepartment of Internal Medicine, Erasmus MC, Rotterdam, Netherlands.ORCID 0000-0001-6821-1048
Jasper J AninkAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Angelika MühlebnerAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Caroline MijnsbergenAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Lieven LagaeDepartment of Development and Regeneration Section Pediatric Neurology, University Hospitals KU Leuven, Leuven, Belgium.
Paolo CuratoloChild Neurology and Psychiatry Unit, Systems Medicine Department, Tor Vergata University, Rome, Italy.
Julita BorkowskaDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.
Krzysztof SadowskiDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.
Dorota Domańska-PakiełaDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.
Magdalena BlazejczykDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.
Floor E JansenDepartment of Child Neurology, Brain Center University Medical Center Utrecht, Utrecht, The Netherlands.
Stef JansonGenomeScan, Leiden, The Netherlands.
Malgorzata UrbanskaDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.ORCID 0000-0001-9521-0366
Aleksandra TempesInternational Institute of Molecular and Cell Biology, Warsaw, Poland.
Bart JanssenGenomeScan, Leiden, The Netherlands.
Kamil SijkoTransition Technologies Science, Warsaw, Poland.ORCID 0000-0002-2203-1065
Konrad WojdanTransition Technologies Science, Warsaw, Poland.
Sergiusz JozwiakDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.ORCID 0000-0003-3350-6326
Katarzyna KotulskaDepartment of Neurology and Epileptology, member of ERN EPICARE, The Children's Memorial Health Institute, Warsaw, Poland.ORCID 0000-0002-5015-250X
Karola LehmannProteome Factory AG, Berlin, Germany.
Eleonora AronicaAmsterdam UMC, University of Amsterdam, Department of (Neuro)Pathology, Amsterdam Neuroscience, Amsterdam, The Netherlands.
Jacek JaworskiInternational Institute of Molecular and Cell Biology, Warsaw, Poland.
David J KwiatkowskiDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, USA. dk@rics.bwh.harvard.edu.ORCID 0000-0002-5668-5219
Children's Memorial Health Institute · PLAmsterdam Neuroscience · NLBrigham and Women's Hospital · USCharles University · CZGenomeScan (Netherlands) · NLInternational Institute of Molecular and Cell Biology · PLMedical University of Vienna · ATUniversity Medical Center Utrecht · NLUniversity of Rome Tor Vergata · ITWarsaw University of Technology · PLBeth Israel Deaconess Medical Center · USCharité - Universitätsmedizin Berlin · DEErasmus MC · NLInstitut Necker Enfants Malades · FRKU Leuven · BEMedical University of Warsaw · PLThe University of Queensland · AUTransition Technologies (Poland) · PLVivantes Klinikum · DEVrije Universiteit Brussel · BE

Funding

European Commission (EC) 602391-2
6 · The paper itself

Abstract

We present a comprehensive multi-omic analysis of the EPISTOP prospective clinical trial of early intervention with vigabatrin for pre-symptomatic epilepsy treatment in Tuberous Sclerosis Complex (TSC), in which 93 infants with TSC were followed from birth to age 2 years, seeking biomarkers of epilepsy development. Vigabatrin had profound effects on many metabolites, increasing serum deoxycytidine monophosphate (dCMP) levels 52-fold. Most serum proteins and metabolites, and blood RNA species showed significant change with age. Thirty-nine proteins, metabolites, and genes showed significant differences between age-matched control and TSC infants. Six also showed a progressive difference in expression between control, TSC without epilepsy, and TSC with epilepsy groups. A multivariate approach using enrollment samples identified multiple 3-variable predictors of epilepsy, with the best having a positive predictive value of 0.987. This rich dataset will enable further discovery and analysis of developmental effects, and associations with seizure development in TSC.

Indexed as

EpilepsyTuberous SclerosisChild, PreschoolClinical Trials as TopicHumansInfantInfant, NewbornMultiomicsProspective StudiesVigabatrinVigabatrin

Identifiers

PMID37996417
PMCPMC10667269
OpenAlexW4388946976

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.