Evidence map›Paper›PMID 37995680›Full record

ArticleCell systems2023

Context-dependent regulation of lipid accumulation in adipocytes by a HIF1α-PPARγ feedback network.

Takamasa Kudo, Michael L Zhao, Stevan Jeknić, Kyle M Kovary, Edward L LaGory, Markus W Covert, Mary N Teruel

Open access · bronzeAbstract read
In one paragraph

Article in Cell systems, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Takamasa KudoDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Michael L ZhaoDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Stevan JeknićDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Kyle M KovaryDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Edward L LaGoryDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305, USA.
Markus W CovertDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA. Electronic address: mcovert@stanford.edu.
Mary N TeruelDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA; Department of Biochemistry and the Drukier Institute of Children's Health, Weill Cornell Medicine, Cornell University, New York, NY 10065, USA. Electronic address: mnt4002@med.cornell.edu.
Stanford University · USCornell University · US

Funding

Stanford Islet Research CoreP30DK116074 · NIDDK · STANFORD UNIVERSITY · PI Seung K Kim · 2017 to 2026
$19.5M
TRAINING & OUTREACH COREP50GM107615 · NIGMS · STANFORD UNIVERSITY · PI FERRELL, JAMES E. · 2013 to 2017
$10.9M
Cell cycle control of adipogenesisR01DK131432 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI Mary N Teruel · 2023 to 2026
$2.0M
Controlling tissue size by noise and feedbackR01DK106241 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI TERUEL, MARY N · 2015 to 2018
$1.4M
Controlling the rate of adipocyte differentiation: Experiments and theoryR01DK101743 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI TERUEL, MARY N · 2015 to 2017
$1.1M
Four Laser, 18 Color Cell Sorter in the SSFFS10RR025518 · NCRR · STANFORD UNIVERSITY · PI HERZENBERG, LEONARD A · 2009 to 2009
$500k
Cell cycle control of adipogenesisR56DK131432 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI TERUEL, MARY N · 2021 to 2021
$211k
Connecting early signaling dynamics to fat cell differentiation using fluorescent biosensors and single cell imagingF31DK112570 · NIDDK · STANFORD UNIVERSITY · PI ZHAO, MICHAEL · 2017 to 2018
$72k
NCRR NIH HHS S10 RR025518NIDDK NIH HHS F31 DK112570NIDDK NIH HHS P30 DK116074NIDDK NIH HHS R01 DK101743NIDDK NIH HHS R01 DK106241NIDDK NIH HHS R01 DK131432NIDDK NIH HHS R56 DK131432NIGMS NIH HHS P50 GM107615
6 · The paper itself

Abstract

Hypoxia-induced upregulation of HIF1α triggers adipose tissue dysfunction and insulin resistance in obese patients. HIF1α closely interacts with PPARγ, the master regulator of adipocyte differentiation and lipid accumulation, but there are conflicting results regarding how this interaction controls the excessive lipid accumulation that drives adipocyte dysfunction. To directly address these conflicts, we established a differentiation system that recapitulated prior seemingly opposing observations made across different experimental settings. Using single-cell imaging and coarse-grained mathematical modeling, we show how HIF1α can both promote and repress lipid accumulation during adipogenesis. Our model predicted and our experiments confirmed that the opposing roles of HIF1α are isolated from each other by the positive-feedback-mediated upregulation of PPARγ that drives adipocyte differentiation. Finally, we identify three factors: strength of the differentiation cue, timing of hypoxic perturbation, and strength of HIF1α expression changes that, when considered together, provide an explanation for many of the previous conflicting reports.

Indexed as

AdipocytesPPAR gammaAdipose TissueFeedbackHumansLipidsLipidsPPAR gammaadipocyteadipose tissuebistable switchcell differentiationHIF1AHIF1αhypoxiaPPARGPPARγtemporal network isolation

Identifiers

PMID37995680
PMCPMC11251692
OpenAlexW4388900433

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.