Evidence map›Paper›PMID 37992308›Full record

ArticleAutophagy2024

ULK1 seen at the single-molecule level during autophagy initiation.

Chiranjib Banerjee, Elias M Puchner, Do-Hyung Kim

Open access · greenAbstract read
In one paragraph

Article in Autophagy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. The Human Autophagy Core Complexes.Annual review of biochemistry · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Chiranjib BanerjeeSchool of Physics and Astronomy, University of Minnesota, Twin Cities, USA.ORCID 0000-0003-0544-0681
Elias M PuchnerSchool of Physics and Astronomy, University of Minnesota, Twin Cities, USA.ORCID 0000-0002-7129-2309
Do-Hyung KimDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Twin Cities, USA.ORCID 0000-0002-2924-4370
University of Minnesota · US

Funding

Mechanisms of mTORC1 signaling to protein degradation pathwaysR35GM130353 · NIGMS · UNIVERSITY OF MINNESOTA · PI Do-Hyung Kim · 2019 to 2026
$4.2M
Developing Diffusion-Contrast Super-Resolution Microscopy to Study Protein Interactions at Extreme Concentration Ratios in Live CellsR21GM127965 · NIGMS · UNIVERSITY OF MINNESOTA · PI PUCHNER, GEORG ELIAS MICHAEL · 2018 to 2019
$283k
NIGMS NIH HHS R21 GM127965NIGMS NIH HHS R35 GM130353
6 · The paper itself

Abstract

Macroautophagy/autophagy research often involves overexpressing proteins to investigate their localization, function and activity. However, this approach can disturb the inherent balance of cellular components, potentially affecting the integrity of the autophagy process. With the advent of genome-editing techniques like CRISPR-Cas9, it is now possible to tag endogenous proteins with fluorescent markers, enabling the study of their behaviors under more physiologically relevant conditions. Nevertheless, conventional microscopy methods have limitations in characterizing the behaviors of proteins expressed at endogenous levels. This challenge can be overcome by single-molecule localization microscopy (SMLM) methods, which provide single-molecule sensitivity and super-resolution imaging capabilities. In our recent study, we used SMLM in combination with genome editing to explore the behavior of endogenous ULK1 during autophagy initiation, yielding unprecedented insights into the autophagy initiation process.

Indexed as

AutophagyClass III Phosphatidylinositol 3-KinasesAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBeclin-1PhosphatidylinositolsAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBeclin-1Class III Phosphatidylinositol 3-KinasesPhosphatidylinositolsGenome editingPALMsingle moleculeSMLMULK1

Identifiers

PMID37992308
PMCPMC10936622
OpenAlexW4388897621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.