Evidence map›Paper›PMID 37991368›Full record

ArticleJournal of virology2023

Interaction of species A rotavirus VP4 with the cellular proteins vimentin and actin related protein 2 discovered by a proximity interactome assay.

Pengfei Hao, Qiaoqiao Qu, Zhaoxia Pang, Letian Li, Shouwen Du, Limin Shang, Chaozhi Jin, Wang Xu, Zhuo Ha, Yuhang Jiang and 5 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Pengfei HaoState Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Key Laboratory for Zoonosis Research, Ministry of Education, College of Veterinary Medicine, Jilin University, Changchun, China.
Qiaoqiao QuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Zhaoxia PangChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Letian LiChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Shouwen DuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Limin ShangState Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing, China.
Chaozhi JinState Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing, China.
Wang XuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Zhuo HaChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Yuhang JiangChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Jing ChenState Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Key Laboratory for Zoonosis Research, Ministry of Education, College of Veterinary Medicine, Jilin University, Changchun, China.
Zihan GaoChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.
Ningyi JinState Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Key Laboratory for Zoonosis Research, Ministry of Education, College of Veterinary Medicine, Jilin University, Changchun, China.ORCID 0000-0002-1959-4465
Jian WangState Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing, China.ORCID 0000-0002-8116-7691
Chang LiChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.ORCID 0000-0002-3267-1859
Chinese Academy of Agricultural Sciences · CNBeijing Proteome Research Center · CNJilin University · CN

Funding

Chinese Academy of Medical Sciences (CAMS) 2020-12M-5-001Ministry of Science and Technology of the People's Republic of China (MOST) 2021YFD1801103-6MOST | National Natural Science Foundation of China (NSFC) 31972719
6 · The paper itself

Abstract

importanceRotavirus (RV) is an important zoonosis virus, which can cause severe diarrhea and extra-intestinal infection. To date, some proteins or carbohydrates have been shown to participate in the attachment or internalization of RV, including HGBAs, Hsc70, and integrins. This study attempted to indicate whether there were other proteins that would participate in the entry of RV; thus, the RV VP4-interacting proteins were identified by proximity labeling. After analysis and verification, it was found that VIM and ACTR2 could significantly promote the proliferation of RV in intestinal cells. Through further viral binding assays after knockdown, antibody blocking, and recombinant protein overexpression, it was revealed that both VIM and ACTR2 could promote RV replication.

Indexed as

Actin-Related Protein 2Capsid ProteinsProtein Interaction MapsRotavirusVimentinAnimalsHumansIntestinesProtein BindingVirus InternalizationVirus ReplicationActin-Related Protein 2Capsid ProteinsVimentinVP4 protein, RotavirusACTR2proximity labelingrotavirusVIMviral entryVP4

Identifiers

PMID37991368
PMCPMC10734455
OpenAlexW4388909023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.