Evidence map›Paper›PMID 37990870›Full record

ArticleIUCrJ2024

Enhancing hydrogen positions in X-ray structures of transition metal hydride complexes with dynamic quantum crystallography.

Magdalena Woińska, Anna A Hoser, Michał L Chodkiewicz, Krzysztof Woźniak

Abstract read
In one paragraph

Article in IUCrJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Role of restraints on hydrogen atoms in Hirshfeld atom refinement: the case of tri-aspartic acid trihydrate.Acta crystallographica Section B, Structural science, crystal engineering and materials · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Current developments and trends in quantum crystallography.Acta crystallographica Section B, Structural science, crystal engineering and materials · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Magdalena WoińskaBiological and Chemical Research Centre, Chemistry Department, University of Warsaw, Żwirki i Wigury 101, Warsaw 02-089, Poland.ORCID 0000-0002-9956-5356
Anna A HoserBiological and Chemical Research Centre, Chemistry Department, University of Warsaw, Żwirki i Wigury 101, Warsaw 02-089, Poland.ORCID 0000-0002-6799-3073
Michał L ChodkiewiczBiological and Chemical Research Centre, Chemistry Department, University of Warsaw, Żwirki i Wigury 101, Warsaw 02-089, Poland.ORCID 0000-0003-4448-445X
Krzysztof WoźniakBiological and Chemical Research Centre, Chemistry Department, University of Warsaw, Żwirki i Wigury 101, Warsaw 02-089, Poland.ORCID 0000-0002-0277-294X

Funding

Narodowe Centrum Nauki 2021/43/D/ST4/03136Narodowe Centrum Nauki DEC-2018/31/B/ST4/02142
6 · The paper itself

Abstract

Hirshfeld atom refinement (HAR) is a method which enables the user to obtain more accurate positions of hydrogen atoms bonded to light chemical elements using X-ray data. When data quality permits, this method can be extended to hydrogen-bonded transition metals (TMs), as in hydride complexes. However, addressing hydrogen thermal motions with HAR, particularly in TM hydrides, presents a challenge. At the same time, proper description of thermal vibrations can be vital for determining hydrogen positions correctly. In this study, we employ tools such as SHADE3 and Normal Mode Refinement (NoMoRe) to estimate anisotropic displacement parameters (ADPs) for hydrogen atoms during HAR and IAM refinements performed for seven structures of TM (Fe, Ni, Cr, Nb, Rh and Os) and metalloid (Sb) hydride complexes for which both the neutron and the X-ray structures have been determined. A direct comparison between neutron and HAR/SHADE3/NoMoRe ADPs reveals that the similarity between neutron hydrogen ADPs and those estimated with NoMoRe or SHADE3 is significantly higher than when hydrogen ADPs are refined with HAR. Regarding TM-H bond lengths, traditional HAR exhibits a slight advantage over the other methods. However, combining NoMoRe/SHADE3 with HAR results in a minor decrease in agreement with neutron TM-H bond lengths. For the Cr complex, for which high-resolution X-ray data were collected, an investigation of resolution-related effects was possible.

Indexed as

Hirshfeld atom refinementNoMoReSHADE3transition metal hydride complexes

Identifiers

PMID37990870
PMCPMC10833390

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.