Evidence map›Paper›PMID 37989723›Full record

ArticleJournal of industrial microbiology & biotechnology2023

Determining mating type and ploidy in Rhodotorula toruloides and its effect on growth on sugars from lignocellulosic biomass.

Daiane Dias Lopes, Bruce S Dien, Ronald E Hector, Vijay Singh, Stephanie R Thompson, Patricia J Slininger, Kyria Boundy-Mills, Sujit S Jagtap, Christopher V Rao

Open access · goldAbstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Daiane Dias LopesUSDA, Agricultural Research Service, National Center for Agricultural Utilization Research, (Bioenergy Research), 1815 N University, Peoria, IL 61604, USA.ORCID 0000-0002-3060-0416
Bruce S DienUSDA, Agricultural Research Service, National Center for Agricultural Utilization Research, (Bioenergy Research), 1815 N University, Peoria, IL 61604, USA.ORCID 0000-0003-3863-6664
Ronald E HectorUSDA, Agricultural Research Service, National Center for Agricultural Utilization Research, (Bioenergy Research), 1815 N University, Peoria, IL 61604, USA.
Vijay SinghDOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Stephanie R ThompsonUSDA, Agricultural Research Service, National Center for Agricultural Utilization Research, (Bioenergy Research), 1815 N University, Peoria, IL 61604, USA.
Patricia J SliningerUSDA, Agricultural Research Service, National Center for Agricultural Utilization Research, (Bioenergy Research), 1815 N University, Peoria, IL 61604, USA.
Kyria Boundy-MillsPhaff Yeast Culture Collection, Food Science and Technology, University of California Davis, One Shields Ave, Davis, CA 95616, USA.
Sujit S JagtapDOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Christopher V RaoDOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Agricultural Research Service · USUniversity of Illinois Urbana-Champaign · USUniversity of California, Davis · US

Funding

Agricultural Research Service 5010-41000-189Office of Science DE-SC0018420
6 · The paper itself

Abstract

Rhodotorula toruloides is being developed for the use in industrial biotechnology processes because of its favorable physiology. This includes its ability to produce and store large amounts of lipids in the form of intracellular lipid bodies. Nineteen strains were characterized for mating type, ploidy, robustness for growth, and accumulation of lipids on inhibitory switchgrass hydrolysate (SGH). Mating type was determined using a novel polymerase chain reaction (PCR)-based assay, which was validated using the classical microscopic test. Three of the strains were heterozygous for mating type (A1/A2). Ploidy analysis revealed a complex pattern. Two strains were triploid, eight haploid, and eight either diploid or aneuploid. Two of the A1/A2 strains were compared to their parents for growth on 75%v/v concentrated SGH. The A1/A2 strains were much more robust than the parental strains, which either did not grow or had extended lag times. The entire set was evaluated in 60%v/v SGH batch cultures for growth kinetics and biomass and lipid production. Lipid titers were 2.33-9.40 g/L with a median of 6.12 g/L, excluding the two strains that did not grow. Lipid yields were 0.032-0.131 (g/g) and lipid contents were 13.5-53.7% (g/g). Four strains had significantly higher lipid yields and contents. One of these strains, which had among the highest lipid yield in this study (0.131 ± 0.007 g/g), has not been previously described in the literature. SUMMARY: The yeast Rhodotorula toruloides was used to produce oil using sugars extracted from a bioenergy grass.

Indexed as

RhodotorulaSugarsBiomassLigninLipidsPloidiesLigninlignocelluloseLipidsSugarsbiofuelslignocelluloseoleaginous yeastPCR assaysingle cell oil

Identifiers

PMID37989723
PMCPMC10690854
OpenAlexW4388922218

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.