Evidence map›Paper›PMID 37987845›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2023

Models to estimate genetic gain of soybean seed yield from annual multi-environment field trials.

Matheus D Krause, Hans-Peter Piepho, Kaio O G Dias, Asheesh K Singh, William D Beavis

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. 110 years of rice breeding at LSU: realized genetic gains and future optimization.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. A framework for simulating genotype-by-environment interaction using multiplicative models.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  11. Article
  12. Article
  13. Understanding the Molecular Regulatory Networks of Seed Size in Soybean.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Matheus D KrauseDepartment of Agronomy, Iowa State University, Ames, IA, USA. krause.d.matheus@gmail.com.ORCID http://orcid.org/0000-0003-2411-9287
Hans-Peter PiephoBiostatistics Unit, University of Hohenheim, Stuttgart, Germany.
Kaio O G DiasDepartment of General Biology, Federal University of Viçosa, Viçosa, Brazil.
Asheesh K SinghDepartment of Agronomy, Iowa State University, Ames, IA, USA.
William D BeavisDepartment of Agronomy, Iowa State University, Ames, IA, USA. wdbeavis@iastate.edu.

Funding

Agricultural Research Service IOW04714National Science Foundation 1830478
6 · The paper itself

Abstract

key messageSimulations demonstrated that estimates of realized genetic gain from linear mixed models using regional trials are biased to some degree. Thus, we recommend multiple selected models to obtain a range of reasonable estimates. Genetic improvements of discrete characteristics are obvious and easy to demonstrate, while quantitative traits require reliable and accurate methods to disentangle the confounding genetic and non-genetic components. Stochastic simulations of soybean [Glycine max (L.) Merr.] breeding programs were performed to evaluate linear mixed models to estimate the realized genetic gain (RGG) from annual multi-environment trials (MET). True breeding values were simulated under an infinitesimal model to represent the genetic contributions to soybean seed yield under various MET conditions. Estimators were evaluated using objective criteria of bias and linearity. Covariance modeling and direct versus indirect estimation-based models resulted in a substantial range of estimated values, all of which were biased to some degree. Although no models produced unbiased estimates, the three best-performing models resulted in an average bias of [Formula: see text] kg/ha[Formula: see text]/yr[Formula: see text] ([Formula: see text] bu/ac[Formula: see text]/yr[Formula: see text]). Rather than relying on a single model to estimate RGG, we recommend the application of several models with minimal and directional bias. Further, based on the parameters used in the simulations, we do not think it is appropriate to use any single model to compare breeding programs or quantify the efficiency of proposed new breeding strategies. Lastly, for public soybean programs breeding for maturity groups II and III in North America, the estimated RGG values ranged from 18.16 to 39.68 kg/ha[Formula: see text]/yr[Formula: see text] (0.27-0.59 bu/ac[Formula: see text]/yr[Formula: see text]) from 1989 to 2019. These results provide strong evidence that public breeders have significantly improved soybean germplasm for seed yield in the primary production areas of North America.

Indexed as

Glycine maxPlant BreedingCytoplasmLinear ModelsSeeds

Identifiers

PMID37987845
PMCPMC10663270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.