Evidence map›Paper›PMID 37987107›Full record

ArticleJournal of Korean medical science2023

Promoter-Specific Variants in NeuroD1 and H3K4me3 Coincident Regions and Clinical Outcomes of Small Cell Lung Cancer.

Seung Soo Yoo, Sunwoong Lee, Jin Eun Choi, Mi Jeong Hong, Sook Kyung Do, Jang Hyuck Lee, Won Kee Lee, Ji Eun Park, Yong Hoon Lee, Sun Ha Choi and 7 more

Open access · goldAbstract read
In one paragraph

Article in Journal of Korean medical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Journal of Korean medical science · 2025
    Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

Seung Soo Yoo *Department of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-7309-9254
Sunwoong Lee *Department of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-6295-1408
Jin Eun ChoiDepartment of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-7833-2257
Mi Jeong HongDepartment of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-9504-334X
Sook Kyung DoDepartment of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-3829-3828
Jang Hyuck LeeDepartment of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-5537-3013
Won Kee LeeMedical Research Collaboration Center in Kyungpook National University Hospital and School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0003-4217-5792
Ji Eun ParkDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-4202-3126
Yong Hoon LeeDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-5972-2866
Sun Ha ChoiDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-9665-7466
Hyewon SeoDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0003-0533-8863
Jaehee LeeDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-8111-7320
Shin Yup LeeDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-2121-7335
Seung Ick ChaDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-7246-0909
Chang Ho KimDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0002-1550-5752
Hyo-Gyoung KangDepartment of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0003-0600-227X
Jae Yong ParkDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Korea.ORCID https://orcid.org/0000-0001-7993-4495
Kyungpook National University · KRKyungpook National University Hospital · KR

Funding

National Research Foundation of Korea NRF-2020R1C1C1011766
6 · The paper itself

Abstract

backgroundNeurogenic differentiation 1 (NeuroD1) is a representative small cell lung cancer (SCLC) transcription regulator involved in the carcinogenesis and behavior of SCLC. Histone modifications play an important role in transcription, and H3 lysine 4 trimethylation (H3K4me3) is primarily associated with promoter regions.

methodsWe investigated the association between single nucleotide polymorphisms (SNPs) in NeuroD1 and H3K4me3 coincident regions, selected using ChIP sequencing (ChIP-seq), and the clinical outcomes of 261 patients with SCLC.

resultsAmong 230 SNPs, two were significantly associated with both the chemotherapy response and overall survival (OS) of patients with SCLC.

conclusionTo summarize, among SNPs selected using ChIP-seq in promoter regions with high peaks in both NeuroD1 and H3K4me3,

Indexed as

Lung NeoplasmsSmall Cell Lung CarcinomaBasic Helix-Loop-Helix ProteinsHistonesHumansPromoter Regions, GeneticBasic Helix-Loop-Helix Proteinshistone H3 trimethyl Lys4HistonesNEUROD1 protein, humanChIP-seqH3K4me3NeuroD1Small Cell Lung CancerVariant

Identifiers

PMID37987107
PMCPMC10659920
OpenAlexW4388647883

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.