Evidence map›Paper›PMID 37986039›Full record

ArticleBMC genomic data2023

Transcriptomic monitoring of Douglas-fir heartwood formation.

Didier Delourme, Laure Brémaud, Idelette Plazanet, Patrick Pélissier, Philippe Label, Nathalie Boizot, Christian Breton, Stéphanie Durand, Guy Costa

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC genomic data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Didier DelourmeUniversité de Limoges, LABCIS, UR 22722, 123 avenue Albert Thomas, Limoges, F-87060, France.
Laure BrémaudUniversité de Limoges, LABCIS, UR 22722, 123 avenue Albert Thomas, Limoges, F-87060, France.
Idelette PlazanetUniversité de Limoges, LABCIS, UR 22722, 123 avenue Albert Thomas, Limoges, F-87060, France.
Patrick PélissierUniversité de Limoges, LABCIS, UR 22722, 123 avenue Albert Thomas, Limoges, F-87060, France.
Philippe LabelUCA, INRAE, UMR PIAF, Clermont-Ferrand, F-63000, France.
Nathalie BoizotUMR 0588 BioForA INRAE-ONF, Orléans, F-45075, France.
Christian BretonUMR 0588 BioForA INRAE-ONF, Orléans, F-45075, France.
Stéphanie DurandUniversité de Limoges, CAPTuR, UMR INSERM/CHU 1308, 2 Rue du Docteur Marcland, Limoges, F-87025, France.
Guy CostaUniversité de Limoges, LABCIS, UR 22722, 123 avenue Albert Thomas, Limoges, F-87060, France. guy.costa@unilim.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesMolecular cues linked to heartwood formation open new (complementary) perspectives to genetic breeding programs of Douglas-fir, a tree species largely cultivated in Europe for the natural durability and civil engineering properties of its wood. DATA DESCRIPTION: RNAs from a single genotype of Douglas-fir, extracted from three distinct wood zones (outer sapwood, inner sapwood and transition zone) at four vegetative seasons to generate an extensive RNA-seq dataset used to apprehend the in-wood dynamic and seasonality of heartwood formation in this hardwood model species. Previously published data collected on somatic embryos of the same genotype could be merged with the present dataset to upgrade grade the Douglas-fir reference transcriptome.

Indexed as

PseudotsugaTranscriptomeGene Expression ProfilingPlant BreedingWoodDouglas-fir transcriptomeHeartwood formationInner sapwoodOuter sapwoodSeasonalityTransition zoneWood tissues

Identifiers

PMID37986039
PMCPMC10662504

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.