Evidence map›Paper›PMID 37985800›Full record

ArticleNature neuroscience2024

TFEB-vacuolar ATPase signaling regulates lysosomal function and microglial activation in tauopathy.

Baiping Wang, Heidi Martini-Stoica, Chuangye Qi, Tzu-Chiao Lu, Shuo Wang, Wen Xiong, Yanyan Qi, Yin Xu, Marco Sardiello, Hongjie Li and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
16.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 72 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Baiping Wang *Huffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-7074-2235
Heidi Martini-Stoica *Huffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0003-1599-9905
Chuangye Qi *Huffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Tzu-Chiao LuHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-9942-2307
Shuo WangHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-7462-6178
Wen XiongHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0002-2825-2061
Yanyan QiHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Yin XuHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Marco SardielloDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Hongjie LiHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Hui ZhengHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA. huiz@bcm.edu.ORCID http://orcid.org/0000-0002-5427-3798
Baylor College of Medicine · USUniversity of North Carolina at Chapel Hill · US

Funding

TMEM106b as a lysosomal adaptor to influence brain aging and tau pathogenesisP01AG066606 · NIA · BAYLOR COLLEGE OF MEDICINE · PI JANKOWSKY, JOANNA L · 2021 to 2025
$13.5M
Knockin Mouse Models of Alzheimers DiseaseR01AG020670 · NIA · BAYLOR COLLEGE OF MEDICINE · PI Hui Zheng · 2002 to 2026
$9.1M
Targeting a lipid-mediated pro-longevity pathway as Alzheimer's therapyRF1AG062257 · NIA · BAYLOR COLLEGE OF MEDICINE · PI WANG, JIN, WANG, MENG CARLA · 2018 to 2020
$4.0M
ROLE OF TFEB IN TAUOPATHYR01NS093652 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2015 to 2025
$3.1M
Knockin mouse models of Alzheimer's DiseaseRF1AG020670 · NIA · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2022 to 2022
$2.3M
ROLE OF TFEB IN TAUOPATHYRF1NS093652 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2021 to 2021
$1.5M
Characterizing age-related decline of neural circuits by single-cell profilingR00AG062746 · NIA · BAYLOR COLLEGE OF MEDICINE · PI LI, HONGJIE · 2021 to 2023
$996k
Characterizing the assembly and age-related decline of neural circuits in Drosophila by single-cell profilingK99AG062746 · NIA · STANFORD UNIVERSITY · PI LI, HONGJIE · 2019 to 2020
$254k
Cure Alzheimer's Fund (Alzheimer's Disease Research Foundation) NANIA NIH HHS P01 AG066606NIA NIH HHS R00 AG062746NIA NIH HHS R01 AG020670NIA NIH HHS RF1 AG020670NIA NIH HHS RF1 AG062257NINDS NIH HHS RF1 NS093652U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) NS093652U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) AG020670U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) AG062257U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) AG062746U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) AG066606
6 · The paper itself

Abstract

Transcription factor EB (TFEB) mediates gene expression through binding to the coordinated lysosome expression and regulation (CLEAR) sequence. TFEB targets include subunits of the vacuolar ATPase (v-ATPase), which are essential for lysosome acidification. Single-nucleus RNA sequencing of wild-type and PS19 (Tau) transgenic mice expressing the P301S mutant tau identified three unique microglia subclusters in Tau mice that were associated with heightened lysosome and immune pathway genes. To explore the lysosome-immune relationship, we specifically disrupted the TFEB-v-ATPase signaling by creating a knock-in mouse line in which the CLEAR sequence of one of the v-ATPase subunits, Atp6v1h, was mutated. CLEAR mutant exhibited a muted response to TFEB, resulting in impaired lysosomal acidification and activity. Crossing the CLEAR mutant with Tau mice led to higher tau pathology but diminished microglia response. These microglia were enriched in a subcluster low in mTOR and HIF-1 pathways and were locked in a homeostatic state. Our studies demonstrate a physiological function of TFEB-v-ATPase signaling in maintaining lysosomal homeostasis and a critical role of the lysosome in mounting a microglia and immune response in tauopathy and Alzheimer's disease.

Indexed as

TauopathiesVacuolar Proton-Translocating ATPasesAnimalsAutophagyBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsLysosomesMiceMice, TransgenicMicrogliaSignal TransductionBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsTcfeb protein, mouseVacuolar Proton-Translocating ATPases

Identifiers

PMID37985800
PMCPMC12203451
OpenAlexW4388823915

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.