Evidence map›Paper›PMID 37985497›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2023

Fast satellite DNA evolution in Nothobranchius annual killifishes.

Anna Voleníková, Karolína Lukšíková, Pablo Mora, Tomáš Pavlica, Marie Altmanová, Jana Štundlová, Šárka Pelikánová, Sergey A Simanovsky, Marek Jankásek, Martin Reichard and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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  10. First karyotype description ofComparative cytogenetics · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

Anna VoleníkováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.ORCID 0000-0002-9504-8044
Karolína LukšíkováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.
Pablo MoraFaculty of Science, University of South Bohemia, České Budějovice, Czech Republic.ORCID 0000-0001-7967-3379
Tomáš PavlicaInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.
Marie AltmanováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.ORCID 0000-0001-7193-8918
Jana ŠtundlováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.ORCID 0000-0001-7890-1608
Šárka PelikánováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.
Sergey A SimanovskySevertsov Institute of Ecology and Evolution, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-0830-7977
Marek JankásekInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.ORCID 0000-0002-1467-8790
Martin ReichardInstitute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.ORCID 0000-0002-9306-0074
Petr NguyenInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic. petr.nguyen@prf.jcu.cz.ORCID 0000-0003-1395-4287
Alexandr SemberInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic. sember@iapg.cas.cz.ORCID 0000-0003-4441-9615
Charles University · CZCzech Academy of Sciences, Institute of Animal Physiology and Genetics · CZMasaryk University · CZSevertsov Institute of Ecology and Evolution · RUSewanee: The University of the South · USUniversidad de Jaén · ESUniversity of South Bohemia in České Budějovice · CZ

Funding

Charles University Research Centre program 204069e-Infrastruktura CZ e-INFRA LM2018140Grantová Agentura České Republiky 19-22346YProjects of Large Research, Development and Innovations Infrastructures and the ELIXIR-CZ project LM2018131RVO of IAPG CAS 67985904Spanish Ministry of Universities with European Union's NextGenerationEU funds UJAR10MS
6 · The paper itself

Abstract

Satellite DNA (satDNA) is a rapidly evolving class of tandem repeats, with some monomers being involved in centromere organization and function. To identify repeats associated with (peri)centromeric regions, we investigated satDNA across Southern and Coastal clades of African annual killifishes of the genus Nothobranchius. Molecular cytogenetic and bioinformatic analyses revealed that two previously identified satellites, designated here as NkadSat01-77 and NfurSat01-348, are associated with (peri)centromeres only in one lineage of the Southern clade. NfurSat01-348 was, however, additionally detected outside centromeres in three members of the Coastal clade. We also identified a novel satDNA, NrubSat01-48, associated with (peri)centromeres in N. foerschi, N. guentheri, and N. rubripinnis. Our findings revealed fast turnover of satDNA associated with (peri)centromeres and different trends in their evolution in two clades of the genus Nothobranchius.

Indexed as

FundulidaeKillifishesAnimalsCentromereDNA, SatelliteEvolution, MolecularDNA, SatelliteCentromere driveConstitutive heterochromatinRepeatExplorerRepetitive sequencessatDNA

Identifiers

PMID37985497
PMCPMC10661780
OpenAlexW4388845282

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.