Evidence map›Paper›PMID 37985228›Full record

ArticleMagnetic resonance in chemistry : MRC2024

Permethylation as a strategy for high-molecular-weight polysaccharide structure analysis by nuclear magnetic resonance-Case study of Xylella fastidiosa extracellular polysaccharide.

Ikenna E Ndukwe, Ian Black, Claudia A Castro, Jiri Vlach, Christian Heiss, Caroline Roper, Parastoo Azadi

Abstract read
In one paragraph

Article in Magnetic resonance in chemistry : MRC, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. mBio · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Ikenna E NdukweComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA.
Ian BlackComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA.
Claudia A CastroDepartment of Microbiology and Plant Pathology, University of California, Riverside, California, USA.
Jiri VlachComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA.ORCID 0000-0002-0874-2055
Christian HeissComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA.ORCID 0000-0003-1118-8953
Caroline RoperDepartment of Microbiology and Plant Pathology, University of California, Riverside, California, USA.
Parastoo AzadiComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA.

Funding

National Glycoscience Resource- CCRC Service and Training - NGlycoR@CCRCR24GM137782 · NIGMS · UNIVERSITY OF GEORGIA · PI Parastoo Azadi · 2020 to 2026
$5.2M
NIGMS NIH HHS R24 GM137782
6 · The paper itself

Abstract

Current practices for structural analysis of extremely large-molecular-weight polysaccharides via solution-state nuclear magnetic resonance (NMR) spectroscopy incorporate partial depolymerization protocols that enable polysaccharide solubilization in suitable solvents. Non-specific depolymerization techniques utilized for glycosidic bond cleavage, such as chemical degradation or ultrasonication, potentially generate structural fragments that can complicate complete and accurate characterization of polysaccharide structures. Utilization of appropriate enzymes for polysaccharide degradation, on the other hand, requires prior structural knowledge and optimal enzyme activity conditions that are not available to an analyst working with novel or unknown compounds. Herein, we describe an application of a permethylation strategy that allows the complete dissolution of intact polysaccharides for NMR structural characterization. This approach is utilized for NMR analysis of Xylella fastidiosa extracellular polysaccharide (EPS), which is essential for the virulence of the plant pathogen that affects multiple commercial crops and is responsible for multibillion dollar losses each year.

Indexed as

XylellaMagnetic Resonance SpectroscopyPolysaccharidesPolysaccharides13C1Hexopolysaccharidehigh molecular weightNMRpermethylationsolution‐state NMRXylella fastidiosa

Identifiers

PMID37985228
PMCPMC11047163

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.