Evidence map›Paper›PMID 37984441›Full record

ArticleProtein science : a publication of the Protein Society2024

The PB1 and the ZZ domain of the autophagy receptor p62/SQSTM1 regulate the interaction of p62/SQSTM1 with the autophagosome protein LC3B.

Lucia Alcober-Boquet, Tabea Zang, Larissa Pietsch, Evelyn Suess, Markus Hartmann, Ewgenij Proschak, Lissy Z F Gross, Mariana Sacerdoti, Stefan Zeuzem, Vladimir V Rogov and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Lucia Alcober-BoquetGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Tabea ZangGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Larissa PietschGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Evelyn SuessGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Markus HartmannInstitut für Pharmazeutische Chemie, Goethe-Universität Frankfurt, Frankfurt am Main, Germany.
Ewgenij ProschakInstitut für Pharmazeutische Chemie, Goethe-Universität Frankfurt, Frankfurt am Main, Germany.
Lissy Z F GrossInstituto de Investigación en Biomedicina de Buenos Aires (IBioBA)-CONICET-Partner Institute of the Max Planck Society, Buenos Aires, Argentina.ORCID 0000-0001-6182-0086
Mariana SacerdotiInstituto de Investigación en Biomedicina de Buenos Aires (IBioBA)-CONICET-Partner Institute of the Max Planck Society, Buenos Aires, Argentina.ORCID 0000-0001-6682-6719
Stefan ZeuzemGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Vladimir V RogovInstitut für Pharmazeutische Chemie, Goethe-Universität Frankfurt, Frankfurt am Main, Germany.
Alejandro E LerouxInstituto de Investigación en Biomedicina de Buenos Aires (IBioBA)-CONICET-Partner Institute of the Max Planck Society, Buenos Aires, Argentina.ORCID 0000-0001-6149-3572
Albrecht PiiperGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.
Ricardo M BiondiGoethe University Frankfurt, Medical Clinic 1, Biomedical Research Laboratory, University Hospital, Frankfurt, Germany.ORCID 0000-0002-8873-7167
Goethe University Frankfurt · DEBiomedicine Research Institute of Buenos Aires - CONICET - Partner Institute of the Max Planck Society · AR

Funding

Agencia Nacional de Promoción Científica y TecnológicaDeutschen Konsortium für Translationale KrebsforschungLOEWE-Zentrum für Translationale Medizin und Pharmakologie
6 · The paper itself

Abstract

Autophagy is a highly conserved cellular process that allows degradation of large macromolecules. p62/SQSTM1 is a key adaptor protein that interacts both with material to be degraded and with LC3 at the autophagosome, enabling degradation of cargos such as protein aggregates, lipid droplets and damaged organelles by selective autophagy. Dysregulation of autophagy contributes to the pathogenesis of many diseases. In this study, we investigated if the interaction of p62/SQSTM1 with LC3B could be regulated. We purified full-length p62/SQSTM1 and established an in vitro assay that measures the interaction with LC3B. We used the assay to determine the role of the different domains of p62/SQSTM1 in the interaction with LC3B. We identified a mechanism of regulation of p62/SQSTM1 where the ZZ and the PB1 domains regulate the exposure of the LIR-sequence to enable or inhibit the interaction with LC3B. A mutation to mimic the phosphorylation of a site on the ZZ domain leads to increased interaction with LC3B. Also, a small compound that binds to the ZZ domain enhances interaction with LC3B. Dysregulation of these mechanisms in p62/SQSTM1 could have implications for diseases where autophagy is affected. In conclusion, our study highlights the regulated nature of p62/SQSTM1 and its ability to modulate the interaction with LC3B through a LIR-sequence Accessibility Mechanism (LAM). Furthermore, our findings suggest the potential for pharmacological modulation of the exposure of LIR, paving the way for future therapeutic strategies.

Indexed as

AutophagosomesMicrotubule-Associated ProteinsAdaptor Proteins, Signal TransducingAutophagySequestosome-1 ProteinAdaptor Proteins, Signal TransducingMicrotubule-Associated ProteinsSequestosome-1 Proteinchemical biologyLC3 and GABARAP proteinsLIRmolecular mechanismp62/SQSTM1XRK3F2

Identifiers

PMID37984441
PMCPMC10751729
OpenAlexW4388865166

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.