Evidence map›Paper›PMID 37983674›Full record

ArticleEMBO reports2023

Genome-wide association and environmental suppression of the mortal germline phenotype of wild C. elegans.

Lise Frézal, Marie Saglio, Gaotian Zhang, Luke Noble, Aurélien Richaud, Marie-Anne Félix

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

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  7. Intraspecific variation in the duration of epigenetic inheritance.bioRxiv : the preprint server for biology · 2025
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  12. ThemicroPublication biology · 2024
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  16. A natural bacterial pathogen ofbioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lise Frézal *Institut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.ORCID 0000-0002-6518-0423
Marie Saglio *Institut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.
Gaotian ZhangInstitut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.ORCID 0000-0001-6468-1341
Luke NobleInstitut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.ORCID 0000-0002-5161-4059
Aurélien RichaudInstitut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.
Marie-Anne FélixInstitut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.
Centre National de la Recherche Scientifique · FR

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

The animal germline lineage needs to be maintained along generations. However, some Caenorhabditis elegans wild isolates display a mortal germline phenotype, leading to sterility after several generations at 25°C. Using a genome-wide association approach, we detect a significant peak on chromosome III around 5 Mb, confirmed by introgressions. Thus, a seemingly deleterious genotype is maintained at intermediate frequency in the species. Environmental rescue is a likely explanation, and indeed associated bacteria and microsporidia suppress the phenotype of wild isolates as well as mutants in small RNA inheritance (nrde-2) and histone modifications (set-2). Escherichia coli strains of the K-12 lineage suppress the phenotype compared to B strains. By shifting a wild strain from E. coli K-12 to E. coli B, we find that memory of the suppressing condition is maintained over several generations. Thus, the mortal germline phenotype of wild C. elegans is in part revealed by laboratory conditions and may represent variation in epigenetic inheritance and environmental interactions. This study also points to the importance of non-genetic memory in the face of environmental variation.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsEscherichia coliGenome-Wide Association StudyGerm CellsPhenotypeCaenorhabditis elegans ProteinsC. elegansepigeneticsGWASmicrobiotamortal germline

Identifiers

PMID37983674
PMCPMC10702804
OpenAlexW4388852446

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.