Evidence map›Paper›PMID 37983500›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

The genome of a bunyavirus cannot be defined at the level of the viral particle but only at the scale of the viral population.

Michel Yvon, Thomas L German, Diane E Ullman, Ranjit Dasgupta, Maxwell H Parker, Sulley Ben-Mahmoud, Eric Verdin, Patrick Gognalons, Aurélie Ancelin, Joséphine Laï Kee Him and 8 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Journal of virology · 2026
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Michel YvonPHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.ORCID 0009-0002-5129-9359
Thomas L GermanDepartment of Entomology, University of Wisconsin, Wisconsin 53706, Madison.
Diane E UllmanDepartment of Entomology and Nematology, University of California, California 95616, Davis.ORCID 0000-0003-3475-5703
Ranjit DasguptaDepartment of Entomology, University of Wisconsin, Wisconsin 53706, Madison.
Maxwell H ParkerDepartment of Entomology, University of Wisconsin, Wisconsin 53706, Madison.
Sulley Ben-MahmoudDepartment of Entomology and Nematology, University of California, California 95616, Davis.
Eric VerdinPathologie végétale, INRAE, Avignon 84143, France.ORCID 0000-0002-6416-1597
Patrick GognalonsPathologie végétale, INRAE, Avignon 84143, France.
Aurélie AncelinCBS, Univ Montpellier, CNRS, INSERM, Montpellier 34090, France.
Joséphine Laï Kee HimCBS, Univ Montpellier, CNRS, INSERM, Montpellier 34090, France.
Justine GirardCBS, Univ Montpellier, CNRS, INSERM, Montpellier 34090, France.
Marie-Stéphanie VernereyPHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.ORCID 0009-0004-4280-6456
Emmanuel FernandezPHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.
Denis FillouxPHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.
Philippe RoumagnacPHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.ORCID 0000-0001-5002-6039
Patrick BronCBS, Univ Montpellier, CNRS, INSERM, Montpellier 34090, France.ORCID 0000-0002-3354-9513
Yannis Michalakis *MIVEGEC, Univ Montpellier, CNRS, IRD, Montpellier 34394, France.ORCID 0000-0003-1929-0848
Stéphane Blanc *PHIM, Univ Montpellier, INRAE, CIRAD, IRD, Institut Agro, Montpellier 34398, France.ORCID 0000-0002-3412-0989
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre National de la Recherche Scientifique · FRUniversity of Wisconsin–Madison · USInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversity of California, Davis · US

Funding

University of Montpellier BLANC-MUSE2020-Multivir
6 · The paper itself

Abstract

Bunyaviruses are enveloped negative or ambisense single-stranded RNA viruses with a genome divided into several segments. The canonical view depicts each viral particle packaging one copy of each genomic segment in one polarity named the viral strand. Several opposing observations revealed nonequal ratios of the segments, uneven number of segments per virion, and even packaging of viral complementary strands. Unfortunately, these observations result from studies often addressing other questions, on distinct viral species, and not using accurate quantitative methods. Hence, what RNA segments and strands are packaged as the genome of any bunyavirus remains largely ambiguous. We addressed this issue by first investigating the virion size distribution and RNA content in populations of the tomato spotted wilt virus (TSWV) using microscopy and tomography. These revealed heterogeneity in viral particle volume and amount of RNA content, with a surprising lack of correlation between the two. Then, the ratios of all genomic segments and strands were established using RNA sequencing and qRT-PCR. Within virions, both plus and minus strands (but no mRNA) are packaged for each of the three L, M, and S segments, in reproducible nonequimolar proportions determined by those in total cell extracts. These results show that virions differ in their genomic content but together build up a highly reproducible genetic composition of the viral population. This resembles the genome formula described for multipartite viruses, with which some species of the order

Indexed as

OrthobunyavirusTospovirusGenome, ViralRNA, ViralVirionRNA, ViralBunyaviralesgenome formulagenome packagingmultipartite virusorthotospovirus

Identifiers

PMID37983500
PMCPMC10691328
OpenAlexW4388819190

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.