Evidence map›Paper›PMID 37981586›Full record

ArticleStress biology2023

Maize heat shock proteins-prospection, validation, categorization and in silico analysis of the different ZmHSP families.

Rubens Diogo-Jr, Edila Vilela de Resende Von Pinho, Renan Terassi Pinto, Lingrui Zhang, Jorge Alberto Condori-Apfata, Paula Andrade Pereira, Danielle Rezende Vilela

Open access · diamondAbstract read
In one paragraph

Article in Stress biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Pan-Genome-Wide Investigation and Co-Expression Network Analysis ofInternational journal of molecular sciences · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Rubens Diogo-JrDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, (47907), USA. rubens.junior@estudante.ufla.br.ORCID http://orcid.org/0000-0003-2584-8158
Edila Vilela de Resende Von PinhoDepartment of Agriculture, Federal University of Lavras (UFLA), Lavras, MG, (37200-900), Brazil.ORCID http://orcid.org/0000-0003-3932-3926
Renan Terassi PintoFaculty of Philosophy and Sciences at Ribeirao Preto, University of Sao Paulo (USP), Ribeirao Preto, SP, (14040-901), Brazil.ORCID http://orcid.org/0000-0003-3187-6454
Lingrui ZhangDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, (47907), USA.
Jorge Alberto Condori-ApfataDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, (47907), USA.ORCID http://orcid.org/0000-0001-9270-1733
Paula Andrade PereiraDepartment of Agriculture, Federal University of Lavras (UFLA), Lavras, MG, (37200-900), Brazil.ORCID http://orcid.org/0000-0001-5789-0532
Danielle Rezende VilelaDepartment of Agriculture, Federal University of Lavras (UFLA), Lavras, MG, (37200-900), Brazil.ORCID http://orcid.org/0000-0002-4161-5154
Purdue University West Lafayette · USUniversidade Federal de Lavras · BRUniversidade de Ribeirão Preto · BR

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior CAPES-Print 88887.370528/2019-00
6 · The paper itself

Abstract

Among the plant molecular mechanisms capable of effectively mitigating the effects of adverse weather conditions, the heat shock proteins (HSPs), a group of chaperones with multiple functions, stand out. At a time of full progress on the omic sciences, they look very promising in the genetic engineering field, especially in order to conceive superior genotypes, potentially tolerant to abiotic stresses (AbSts). Recently, some works concerning certain families of maize HSPs (ZmHSPs) were published. However, there was still a lack of a study that, with a high degree of criteria, would fully conglomerate them. Using distinct but complementary strategies, we have prospected as many ZmHSPs candidates as possible, gathering more than a thousand accessions. After detailed data mining, we accounted for 182 validated ones, belonging to seven families, which were subcategorized into classes with potential for functional parity. In them, we identified dozens of motifs with some degree of similarity with proteins from different kingdoms, which may help explain some of their still poorly understood means of action. Through in silico and in vitro approaches, we compared their expression levels after controlled exposure to several AbSts' sources, applied at diverse tissues, on varied phenological stages. Based on gene ontology concepts, we still analyzed them from different perspectives of term enrichment. We have also searched, in model plants and close species, for potentially orthologous genes. With all these new insights, which culminated in a plentiful supplementary material, rich in tables, we aim to constitute a fertile consultation source for those maize researchers attracted by these interesting stress proteins.

Indexed as

BiotechnologyCompendiumCornDroughtGenomicsStress

Identifiers

PMID37981586
PMCPMC10482818
OpenAlexW4386481576

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.