Evidence map›Paper›PMID 37980495›Full record

ArticleBMC medical genomics2023

The diagnostic/prognostic roles and biological function of the IFIT family members in acute myeloid leukemia.

YiFan Zhao, Yi Zhang, WenYi Lu, Rui Sun, RuiTing Guo, XinPing Cao, Xingzhong Liu, Cuicui Lyu, MingFeng Zhao

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

YiFan Zhao *First Center Clinic College of Tianjin Medical University, Tianjin, People's Republic of China.
Yi Zhang *First Center Clinic College of Tianjin Medical University, Tianjin, People's Republic of China.
WenYi LuDepartment of Hematology, Tianjin First Central Hospital, Tianjin, People's Republic of China.
Rui SunSchool of Medicine, Nankai University, Tianjin, People's Republic of China.
RuiTing GuoFirst Center Clinic College of Tianjin Medical University, Tianjin, People's Republic of China.
XinPing CaoFirst Center Clinic College of Tianjin Medical University, Tianjin, People's Republic of China.
Xingzhong LiuState Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Molecular Microbiology and Technology of the Ministry of Education, Department of Microbiology, College of Life Sciences, Nankai University, Tianjin, People's Republic of China.
Cuicui LyuDepartment of Hematology, Tianjin First Central Hospital, Tianjin, People's Republic of China. lvcui689@163.com.
MingFeng ZhaoFirst Center Clinic College of Tianjin Medical University, Tianjin, People's Republic of China. mingfengzhao@sina.com.
Tianjin Medical University · CNTianjin First Center Hospital · CNNankai University · CNState Key Laboratory of Medicinal Chemical Biology

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Interferon-induced protein with tetratricopeptide repeat (IFIT) family, IFIT1/2/3/5, play an important role in different tumors progression. However, the prognosis significance and biological role of IFIT family members in acute myeloid leukemia (AML) remains unclear.

methodsWe obtained the gene expression data and clinical information of 173 AML patients from The Cancer Genome Atlas (TCGA) database. Several databases were used in our study, including GEPIA, MethSurv, STRING, GSCA and GeneMANIA database.

resultsThe mRNA expression of IFIT1/2/3/5 was elevated in AML patients and had a high ability to distinguish AML from controls based on the receiver operating characteristic (ROC) curve (AUC > 0.9). Kaplan-Meier survival analysis showed that higher levels of IFIT2/3/5 expression predict poor prognosis in AML patients. Besides, the DNA methylation analysis suggested that 7 CpG sites of IFIT2, 4 CpG sites of IFIT3 and 10 CpG sites of IFIT5 were significantly associated with the prognosis of AML patients. In addition, IFIT2/3/5 expression was significantly positively associated with the immune cell infiltration and immune checkpoint expression, such as CTLA4, PDCD1, LAG3, and TIGIT. Finally, drug sensitivity analysis revealed that AML patients with high expression of IFIT2/3/5 were resistant to multiple drugs, but sensitive to dasatinib.

conclusionIFIT family genes might serve as biomarkers for diagnosis, prognosis and drug sensitivity in AML patients. The activation or blocking of IFIT-related signaling pathways may provide novel insights into immunotherapy for patients with AML.

Indexed as

Leukemia, Myeloid, AcuteHumansInterferonsPrognosisRNA-Binding ProteinsSignal TransductionInterferonsRNA-Binding ProteinsAcute myeloid leukemiaBiomarkerDrug sensitivityIFITImmune checkpointsImmune infiltrationPrognosis

Identifiers

PMID37980495
PMCPMC10657597
OpenAlexW4388795191

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.