Evidence map›Paper›PMID 37980405›Full record

ArticleNature communications2023

Comprehensive genomic characterization of HER2-low and HER2-0 breast cancer.

Paolo Tarantino, Hersh Gupta, Melissa E Hughes, Janet Files, Sarah Strauss, Gregory Kirkner, Anne-Marie Feeney, Yvonne Li, Ana C Garrido-Castro, Romualdo Barroso-Sousa and 17 more

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Trial
  4. The immunology of human breast cancer.Nature reviews. Immunology · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Redefining breast cancer: therapeutic opportunities in HER2-low and emerging molecular subtypes.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
  9. Observational
  10. Article
  11. Article
  12. Review
  13. Article
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  18. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors.

Paolo Tarantino *Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. paolo_tarantino@dfci.harvard.edu.ORCID http://orcid.org/0000-0001-8686-0228
Hersh Gupta *Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Melissa E HughesMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Janet FilesMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Sarah StraussMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Gregory KirknerMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Anne-Marie FeeneyMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Yvonne LiMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Ana C Garrido-CastroMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-5989-6636
Romualdo Barroso-SousaDasa Institute for Education and Research (IEPD), Brasilia, Brazil.
Brittany L BychkovskyBreast Oncology Program, Dana-Farber Brigham Cancer Center, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7969-0603
Simona DiLascioMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Lynette ShollMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9532-9735
Laura MacConaillMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Neal LindemanMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Bruce E JohnsonMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Matthew MeyersonMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9133-8108
Rinath JeselsohnMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7996-7529
Xintao QiuMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8560-7017
Rong LiMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0009-0000-1046-9580
Henry LongMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0001-6849-6629
Eric P WinerYale Cancer Center, Yale School of Medicine, Smilow Cancer Hospital, New Haven, CT, USA.
Deborah DillonHarvard Medical School, Boston, MA, USA.
Giuseppe CuriglianoDivision of Early Drug Development, European Institute of Oncology IRCCS, Milano, Italy.ORCID http://orcid.org/0000-0003-1781-2518
Andrew D CherniackMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Sara M TolaneyMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-5940-8671
Nancy U LinMedical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Tissue and Pathology CoreP50CA168504 · NCI · DANA-FARBER CANCER INST · PI Nabihah Tayob · 2013 to 2026
$30.1M
NCATS NIH HHS UL1 TR001863NCI NIH HHS P50 CA168504
6 · The paper itself

Abstract

The molecular underpinnings of HER2-low and HER2-0 (IHC 0) breast tumors remain poorly defined. Using genomic findings from 1039 patients with HER2-negative metastatic breast cancer undergoing next-generation sequencing from 7/2013-12/2020, we compare results between HER2-low (n = 487, 47%) and HER2-0 tumors (n = 552, 53%). A significantly higher number of ERBB2 alleles (median copy count: 2.05) are observed among HER2-low tumors compared to HER2-0 (median copy count: 1.79; P = 2.36e-6), with HER2-0 tumors harboring a higher rate of ERBB2 hemideletions (31.1% vs. 14.5%). No other genomic alteration reaches significance after accounting for multiple hypothesis testing, and no significant differences in tumor mutational burden are observed between HER2-low and HER2-0 tumors (median: 7.26 mutations/megabase vs. 7.60 mutations/megabase, p = 0.24). Here, we show that the genomic landscape of HER2-low and HER2-0 tumors does not differ significantly, apart from a higher ERBB2 copy count among HER2-low tumors, and a higher rate of ERBB2 hemideletions in HER2-0 tumors.

Indexed as

Breast NeoplasmsBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesFemaleGenomicsHumansBiomarkers, TumorErb-b2 Receptor Tyrosine Kinases

Identifiers

PMID37980405
PMCPMC10657399

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.