Evidence map›Paper›PMID 37975847›Full record

ArticleInvestigative ophthalmology & visual science2023

Next-Generation Sequencing of Vitreoretinal Lymphoma by Vitreous Liquid Biopsy: Diagnostic Potential and Genotype/Phenotype Correlation.

Jay Jiyong Kwak, Kwang Seob Lee, Junwon Lee, Yong Joon Kim, Eun Young Choi, Suk Ho Byeon, Won Seok Chang, Yu Ri Kim, Jin Seok Kim, Saeam Shin and 3 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Decoding IGLL5 Mutation-Mediated BCR Signaling: A Novel Mechanism of CD8Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Intraocular Lymphoma: A Review.Journal of ophthalmic & vision research · 2025
    Review
  9. Molecular diagnosis of vitreoretinal lymphoma.Taiwan journal of ophthalmology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Jay Jiyong KwakDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Kwang Seob LeeDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Junwon LeeDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Yong Joon KimDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Eun Young ChoiDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Suk Ho ByeonDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Won Seok ChangDepartment of Neurosurgery, Yonsei University College of Medicine, Seoul, Korea.
Yu Ri KimDivision of Hematology, Department of Internal Medicine, Yonsei University College of Medicine, Seoul, Korea.
Jin Seok KimDivision of Hematology, Department of Internal Medicine, Yonsei University College of Medicine, Seoul, Korea.
Saeam ShinDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Seung-Tae LeeDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Sung Soo KimDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Christopher Seungkyu LeeDepartment of Ophthalmology, The Institute of Vision Research, Yonsei University College of Medicine, Seoul, Korea.
Yonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To determine the diagnostic potential of next-generation sequencing (NGS) in vitreous samples, analyze genotype-phenotype characteristics, and compare NGS of matched vitreous and brain samples in patients with associated central nervous system lymphoma (CNSL). Methods: A total of 32 patients suspected of vitreoretinal lymphoma (VRL) who underwent diagnostic vitrectomy and NGS were included in this retrospective observational case-series. Fresh vitreous specimens from diagnostic vitrectomy of VRL-suspected patients underwent NGS using a custom panel targeting 747 candidate genes for lymphoma. They also underwent malignancy cytology, interleukin (IL)-10/IL-6, immunoglobulin heavy chain (IGH)/immunoglobulin kappa light chain (IGK) monoclonality testing. MYD88 L265P mutation was examined from anterior chamber tap samples. The diagnosis of VRL was made based on typical clinical characteristics for VRL, as well as malignant cytology, IGH/IGK clonality, or IL-10/IL-6 > 1. Sensitivity and specificity of NGS were compared with conventional diagnostic tests. Brain tissues suspected of lymphoma were collected by stereotactic biopsy and underwent NGS. Genetic variations detected in NGS of vitreous and brain tissue specimens were compared. Results: The sensitivity values for cytology, IL-10/IL-6 > 1, clonality assays for IGH and IGK, MYD88 L265P detection in anterior chamber tap samples, and vitreous NGS were 0.23, 0.83, 0.68, 0.79, 0.67, and 0.85, with specificity values of 1.00, 0.83, 0.50, 0.25, 0.83, and 0.83, respectively. The sensitivity (0.85) of vitreous NGS was the highest compared to other conventional diagnostic tests for VRL. The most common mutations were MYD88 (91%), CDKN2A (36%), PIM1 (32%), IGLL5 (27%), and ETV6 (23%). Although several gene alterations demonstrated heterogeneity between the brain and eyes, some common mutational profiles were observed in matched vitreous and brain samples. Conclusions: Overall, NGS of the vitreous demonstrated high sensitivity among conventional diagnostic tests. VRL and CNSL appeared to have both shared and distinct genetic variations, which may suggest site-specific variations from a common origin.

Indexed as

LymphomaRetinal NeoplasmsBiopsyGenotypeHigh-Throughput Nucleotide SequencingHumansInterleukin-10Interleukin-6Liquid BiopsyMyeloid Differentiation Factor 88PhenotypeRetrospective StudiesVitreous BodyInterleukin-10Interleukin-6Myeloid Differentiation Factor 88

Identifiers

PMID37975847
PMCPMC10664732
OpenAlexW4388760317

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.