Evidence map›Paper›PMID 37974938›Full record

ArticleACS medicinal chemistry letters2023

Covalent Stapling of the Cereblon Sensor Loop Histidine Using Sulfur-Heterocycle Exchange.

Justin T Cruite, Radosław P Nowak, Katherine A Donovan, Scott B Ficarro, Huang Huang, Hu Liu, Yingpeng Liu, Jarrod A Marto, Rebecca J Metivier, Eric S Fischer and 1 more

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  9. Article
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  11. Imidazoles are Tunable Nucleofuges for Developing Tyrosine-Reactive Electrophiles.Chembiochem : a European journal of chemical biology · 2024
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Justin T CruiteCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.
Radosław P NowakCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0002-0605-0071
Katherine A DonovanDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0002-8539-5106
Scott B FicarroDepartment of Cancer Biology, Department of Oncologic Pathology, Blais Proteomics Center, and Center for Emergent Drug Targets, Dana-Farber Cancer Institute, Boston Massachusetts 02215, United States.
Huang HuangCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.
Hu LiuCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.
Yingpeng LiuCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0002-2752-2947
Jarrod A MartoDepartment of Cancer Biology, Department of Oncologic Pathology, Blais Proteomics Center, and Center for Emergent Drug Targets, Dana-Farber Cancer Institute, Boston Massachusetts 02215, United States.ORCID https://orcid.org/0000-0003-2086-1134
Rebecca J MetivierCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0001-9929-6857
Eric S FischerCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0001-7337-6306
Lyn H JonesCenter for Protein Degradation, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.ORCID https://orcid.org/0000-0002-8388-5865
Harvard University · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · US

Funding

Illuminating Function of the Understudied Druggable KinomeU24DK116204 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JOHNSON, GARY L. · 2017 to 2022
$13.6M
Novel Screening Platform for Discovery of DUB Targeting ProbesR01CA233800 · NCI · DANA-FARBER CANCER INST · PI BUHRLAGE, SARA J, MARTO, JARROD A. · 2019 to 2022
$2.5M
Tools for DUB Drug DiscoveryR21CA247671 · NCI · DANA-FARBER CANCER INST · PI BUHRLAGE, SARA J, MARTO, JARROD A. · 2020 to 2021
$648k
NCI NIH HHS R01 CA233800NCI NIH HHS R21 CA247671NIDDK NIH HHS U24 DK116204
6 · The paper itself

Abstract

Site-specific modification of amino acid residues in protein binding pockets using sulfonyl exchange chemistry expands the druggable proteome by enabling the development of covalent modulators that target residues beyond cysteine. Sulfonyl fluoride and triazole electrophiles were incorporated previously into the cereblon (CRBN) molecular glue degrader EM12, to covalently engage His353 within the CRBN sensor loop, but these probes had poor human plasma stability. Attenuation of intrinsic reactivity through the development of sulfonyl pyrazoles, imidazoles, and nucleobases enhanced plasma stability, and several compounds retained efficient labeling of His353. For example, sulfonyl imidazole EM12-SO

Identifiers

PMID37974938
PMCPMC10641907
OpenAlexW4387899537

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.