Evidence map›Paper›PMID 37974273›Full record

ArticleBiotechnology for biofuels and bioproducts2023

Key genes of electron transfer, the nitrogen cycle and tetracycline removal in bioelectrochemical systems.

Xiaodong Zhao, Xiaorui Qin, Xiuqing Jing, Teng Wang, Qingqing Qiao, Xiaojing Li, Pingmei Yan, Yongtao Li

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 20 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Xiaodong ZhaoCollege of Biological Sciences and Technology, Taiyuan Normal University, Yuci, 030619, People's Republic of China.
Xiaorui QinCollege of Biological Sciences and Technology, Taiyuan Normal University, Yuci, 030619, People's Republic of China.
Xiuqing JingCollege of Biological Sciences and Technology, Taiyuan Normal University, Yuci, 030619, People's Republic of China.
Teng WangDepartment of Life Science, Changzhi University, Changzhi, 046011, People's Republic of China.
Qingqing QiaoCollege of Biological Sciences and Technology, Taiyuan Normal University, Yuci, 030619, People's Republic of China.
Xiaojing LiAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, MARA, Tianjin Key Laboratory of Agro-Environment and Agro-Product Safety, Tianjin, 300191, People's Republic of China. lixiaojing@caas.cn.
Pingmei YanCollege of Biological Sciences and Technology, Taiyuan Normal University, Yuci, 030619, People's Republic of China.
Yongtao LiCollege of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Taiyuan Normal University · CNAgro-Environmental Protection Institute · CNChangzhi University · CNSouth China Agricultural University · CN

Funding

National Natural Science Foundation of China 41977133National Natural Science Foundation of China 42007121Shanxi Provincial Education Department 2020L0536
6 · The paper itself

Abstract

backgroundSoil microbial fuel cells (MFCs) can remove antibiotics and antibiotic resistance genes (ARGs) simultaneously, but their removal mechanism is unclear. In this study, metagenomic analysis was employed to reveal the functional genes involved in degradation, electron transfer and the nitrogen cycle in the soil MFC.

resultsThe results showed that the soil MFC effectively removed tetracycline in the overlapping area of the cathode and anode, which was 64% higher than that of the control. The ARGs abundance increased by 14% after tetracycline was added (54% of the amplified ARGs belonged to efflux pump genes), while the abundance decreased by 17% in the soil MFC. Five potential degraders of tetracycline were identified, especially the species Phenylobacterium zucineum, which could secrete the 4-hydroxyacetophenone monooxygenase encoded by EC 1.14.13.84 to catalyse deacylation or decarboxylation. Bacillus, Geobacter, Anaerolinea, Gemmatirosa kalamazoonesis and Steroidobacter denitrificans since ubiquinone reductase (encoded by EC 1.6.5.3), succinate dehydrogenase (EC 1.3.5.1), Coenzyme Q-cytochrome c reductase (EC 1.10.2.2), cytochrome-c oxidase (EC 1.9.3.1) and electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) served as complexes I, II, III, IV and ubiquinone, respectively, to accelerate electron transfer. Additionally, nitrogen metabolism-related gene abundance increased by 16% to support the microbial efficacy in the soil MFC, and especially EC 1.7.5.1, and coding the mutual conversion between nitrite and nitrate was obviously improved.

conclusionsThe soil MFC promoted functional bacterial growth, increased functional gene abundance (including nitrogen cycling, electron transfer, and biodegradation), and facilitated antibiotic and ARG removal. Therefore, soil MFCs have expansive prospects in the remediation of antibiotic-contaminated soil. This study provides insight into the biodegradation mechanism at the gene level in soil bioelectrochemical remediation.

Indexed as

Electron transferFunctional geneNitrogen cycleSoil microbial fuel cellTetracycline removal

Identifiers

PMID37974273
PMCPMC10652473
OpenAlexW4388731723

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.