Evidence map›Paper›PMID 37974077›Full record

ArticleBMC genomics2023

Genome-wide analysis of lectins in cyanobacteria: from evolutionary mode to motif patterns.

Tongli Xu, Yulin Cui, Song Qin, Yin-Chu Wang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Tongli XuShandong University of Traditional Chinese Medicine, Jinan, 250335, China.
Yulin CuiBinzhou Medical University, Yantai, 264003, China.
Song QinYantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, China. sqin@yic.ac.cn.
Yin-Chu WangYantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, China. ycwang@yic.ac.cn.
Binzhou Medical University · CNChinese Academy of Sciences · CNShandong University of Traditional Chinese Medicine · CNYantai Institute of Coastal Zone Research · CN

Funding

National Basic Science Data Center NBSDC-DB-22National Key Research and Development Program 2018YFA0903000
6 · The paper itself

Abstract

Lectins are glycoproteins that can bind to specific carbohydrates, and different lectin families exhibit different biological activities. They are also present in the cyanobacteria and many of them have shown excellent therapeutic effect, which deserve for bioprospecting. However, in comparison to those from terrestrial plants, the current knowledge on cyanobacterial lectins is very limited. To this end, genome-wide analyses were performed to find out their evolutionary mode and motif patterns in 316 genomes of representative taxa. In results, 196 putative cyanobacterial lectins were dig out and 105 of them were classified into known families. Seven lectins were found to be belonged to distinct two lectin families, and they may have the potential activities of both lectin families. Whereas no MFP-2, Chitin, and Nictaba family lectins were found. What's more, the Legume lectin-like lectin family was found to be the richest and most complex in cyanobacteria, which could be a main research direction for future cyanobacterial lectin bioprospecting and development. Our classification and prediction of cyanobacteria lectins is expected to provide assistance in the development of lectin-based medicine and provide solutions to the current thorny viral and tumor diseases in humans.

Indexed as

CyanobacteriaLectinsBiological EvolutionGenome-Wide Association StudyGlycoproteinsHumansPlant LectinsGlycoproteinsLectinsPlant LectinsCyanobacteriaEvolutionGene familyLectinMotif

Identifiers

PMID37974077
PMCPMC10655256
OpenAlexW4388728267

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.