Evidence map›Paper›PMID 37974063›Full record

ArticleBMC microbiology2023

Whole genome analysis of echinocandin non-susceptible Candida Glabrata clinical isolates: a multi-center study in China.

Yi Li, Xin Hou, Ruoyu Li, Kang Liao, Ling Ma, Xiaoming Wang, Ping Ji, Haishen Kong, Yun Xia, Hui Ding and 6 more

Erratum issuedOpen access · goldAbstract readMulticenter Study
In one paragraph

Article in BMC microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Observational
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 11 institutions in 1 country.

Yi LiDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Xin HouDepartment of Laboratory Medicine, Peking University Third Hospital, Peking University, Beijing, China.
Ruoyu LiDepartment of Dermatology and Venerology, Peking University First Hospital, Peking University, Beijing, China.
Kang LiaoDepartment of Laboratory Medicine, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, China.
Ling MaUnion Hospital Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China.
Xiaoming WangThe First Hospital of Jilin University, Jilin, China.
Ping JiDepartment of Laboratory Medicine, The First Affiliated Hospital of Xinjiang Medical University, Wulumuqi, China.
Haishen KongDepartment of Microbiology, The First Affiliated Hospital of Zhejiang University, Hangzhou, China.
Yun XiaThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Hui DingDepartment of Laboratory Medicine, Lishui Municipal Central Hospital, Lishui, China.
Wei KangDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Ge ZhangDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Jin LiDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Meng XiaoDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yingxing LiBiomedical Engineering Facility of National Infrastructures for Translational Medicine, Peking Union Medical College Hospital, Beijing, 100730, China. liyingxing@pumch.cn.
Yingchun XuDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China. xycpumch@139.com.
Peking Union Medical College Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNChongqing Medical University · CNFirst Affiliated Hospital of Xinjiang Medical University · CNFirst Affiliated Hospital Zhejiang University · CNFirst Hospital of Jilin University · CNLishui Central Hospital · CNPeking University · CNPeking University First Hospital · CNSun Yat-sen University · CNWuhan Union Hospital · CN

Funding

National High Level Hospital Clinical Research Funding 2022-PUMCH-C-052National Key Research and Development Program of China 2022YFC2303002National Natural Science Foundation of China 32000024National Natural Science Foundation of China 81971979National Natural Science Foundation of China 82002178
6 · The paper itself

Abstract

backgroundCandida glabrata is an important cause of invasive candidiasis. Echinocandins are the first-line treatment of invasive candidiasis caused by C. glabrata. The epidemiological echinocandin sensitivity requires long-term surveillance and the understanding about whole genome characteristics of echinocandin non-susceptible isolates was limited.

resultsThe present study investigated the echinocandin susceptibility of 1650 C. glabrata clinical isolates in China from August 2014 to July 2019. The in vitro activity of micafungin was significantly better than those of caspofungin and anidulafungin (P < 0.001), assessed by MIC

conclusionsThe echinocandins are highly active against C. glabrata in China with a resistant rate of 0.79%. Echinocandin non-susceptible isolates carried common evolved genes which are related with reduced caspofungin sensitivity. In-host evolution of C. glabrata accompanied intensive changing of adhesins profile.

Indexed as

Candidiasis, InvasiveEchinocandinsAntifungal AgentsCandida glabrataCandidiasisCaspofunginChinaDrug Resistance, FungalGenome-Wide Association StudyHumansMicrobial Sensitivity TestsAntifungal AgentsCaspofunginEchinocandinsCandida GlabrataEchinocandin resistanceWhole genome sequence

Identifiers

PMID37974063
PMCPMC10652494
OpenAlexW4388724933

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.