Evidence map›Paper›PMID 37974016›Full record

ArticleScientific reports2023

Establishing the normal range of sperm DNA fragmentation index (% DFI) for rhesus macaques.

Fernanda C Burch, Philberta Y Leung, Eric McDonald, Jared Jensen, Emily Mishler, Nadine Piekarski, Camilla M Mendes, Andrew Sylwester, Carol B Hanna

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Fernanda C BurchOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA. burchf@ohsu.edu.
Philberta Y LeungOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.
Eric McDonaldVaccine & Gene Therapy Institute, Oregon Health & Science University, Beaverton, OR, USA.
Jared JensenOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.
Emily MishlerOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.
Nadine PiekarskiOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.
Camilla M MendesCollege of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, SP, Brazil.
Andrew SylwesterVaccine & Gene Therapy Institute, Oregon Health & Science University, Beaverton, OR, USA.
Carol B HannaOregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR, USA.
Oregon National Primate Research Center · USOregon Health & Science University · USChildren's Cancer Therapy Development Institute · USUniversidade de São Paulo · BR

Funding

Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
NIH HHS P51 OD011092
6 · The paper itself

Abstract

The Sperm Chromatin Structure Assay (SCSA) is a robust test with high repeatability and precision. It is a clinically accepted assay that defines risk for infertility in men by measuring the degree of DNA fragmentation (% DFI) in sperm. The objective of this study was to adapt and validate the SCSA for rhesus macaques (Macaca mulatta) and establish a range for % DFI in fertile males. Sperm samples from two different males were used to produce a % DFI validation curve before establishing a range using additional samples from n = 11 males. Sperm labeled with acridine orange were analyzed by flow cytometry to measure green fluorescence (native or intact DNA) and red fluorescence (fragmented DNA). Data were exported to FlowJo software to determine the % DFI for each sample. DNA fragmentation ranged from 0.1 to 2.4% DFI, with a mean ± SD = 1.1 ± 0.7% DFI (validation curve optimized to R

Indexed as

Infertility, MaleSemenAnimalsChromatinDNADNA FragmentationHumansMacaca mulattaMaleReference ValuesSpermatozoaChromatinDNA

Identifiers

PMID37974016
PMCPMC10654681
OpenAlexW4388728075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.