ArticleNature microbiology2023
Obligate biotroph downy mildew consistently induces near-identical protective microbiomes in Arabidopsis thaliana.
Article in Nature microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed, 45 citations in OpenAlex.
- Synthetic communities and metabolite-driven enrichment of keystone rhizosphere microbial taxa suppress bacterial wilt disease in peanut.Plant communications · 2026Article
- Rhizobacteria-Induced Systemic Priming Against Fungal Pathogens Involves Hydroxycinnamic Acid Amides.Plant, cell & environment · 2026Article
- Streptomyces sesquiterpenes elicit 10-HCA secretion and recruit disease-suppressive microbiota to enhance banana Fusarium wilt resistance.Nature communications · 2026Article
- Benzoxazinoid-mediated microbiome feedbacks enhance Arabidopsis growth and defence.The New phytologist · 2026Article
- Targeting and activation of BraATG8i by an RXLR effector DM459 contribute to downy mildew resistance inHorticulture research · 2026Article
- Oomycete plant pathogens: biology, pathogenesis and emerging control strategies.Nature reviews. Microbiology · 2026Review
- Phenolic acid biosynthesis is associated with deleterious microbiome changes during Plasmodiophora brassicae-induced clubroot in pakchoi.Microbiome · 2026Article
- Diverse rhizospheric Bacillus are required for protection against a leaf pathogen.The ISME journal · 2026Article
- Friends and foes in the obligate plant pathobiome.PLoS pathogens · 2025Article
- GH25 lysozyme mediates tripartite interkingdom interactions and microbial competition on the plant leaf surface.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- A new scenario of pathogen-microbiota interactions involving the oomycete Plasmopara viticola.FEMS microbiology ecology · 2025Article
- Roots: metabolic architects of beneficial microbiome assembly.Plant physiology · 2025Review
- Potential and challenges for application of microbiomes in agriculture.The Plant cell · 2025Review
- Soil microbial legacy mediated by buckwheat flavonoids enhances cabbage resistance to clubroot disease.Microbiome · 2025Article
- Microbiome Engineering for Sustainable Rice Production: Strategies for Biofertilization, Stress Tolerance, and Climate Resilience.Microorganisms · 2025Review
- Downy mildew disease-suppressive soils transmit a protective core microbiome to the phyllosphere.The ISME journal · 2025Article
- Temporal dynamics of walnut phyllosphere microbiota under synergistic pathogen exposure and environmental perturbation.Frontiers in microbiology · 2025Article
- Seed tuber microbiome can predict growth potential of potato varieties.Nature microbiology · 2025Article
- Rhizosphere legacy of leaf-diseased rice and its impact on next generation.Frontiers in microbiology · 2025Article
- Microbiome responses to naturalPlant and soil · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors at 1 institution in 2 countries.
Funding
Abstract
Hyaloperonospora arabidopsidis (Hpa) is an obligately biotrophic downy mildew that is routinely cultured on Arabidopsis thaliana hosts that harbour complex microbiomes. We hypothesized that the culturing procedure proliferates Hpa-associated microbiota (HAM) in addition to the pathogen and exploited this model system to investigate which microorganisms consistently associate with Hpa. Using amplicon sequencing, we found nine bacterial sequence variants that are shared between at least three out of four Hpa cultures in the Netherlands and Germany and comprise 34% of the phyllosphere community of the infected plants. Whole-genome sequencing showed that representative HAM bacterial isolates from these distinct Hpa cultures are isogenic and that an additional seven published Hpa metagenomes contain numerous sequences of the HAM. Although we showed that HAM benefit from Hpa infection, HAM negatively affect Hpa spore formation. Moreover, we show that pathogen-infected plants can selectively recruit HAM to both their roots and shoots and form a soil-borne infection-associated microbiome that helps resist the pathogen. Understanding the mechanisms by which infection-associated microbiomes are formed might enable breeding of crop varieties that select for protective microbiomes.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.