Evidence map›Paper›PMID 37972144›Full record

ArticlePloS one2023

Computational exploration of novel ROCK2 inhibitors for cardiovascular disease management; insights from high-throughput virtual screening, molecular docking, DFT and MD simulation.

Iqra Ali, Muhammad Nasir Iqbal, Muhammad Ibrahim, Ihtisham Ul Haq, Wadi B Alonazi, Abdul Rauf Siddiqi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Iqra AliDepartment of Biosciences, COMSATS University Islamabad, Islamabad Campus, Islamabad, Pakistan.ORCID 0000-0001-7165-7307
Muhammad Nasir IqbalDepartment of Bioinformatics, The Islamia University of Bahawalpur, Bahawalpur, Pakistan.
Muhammad IbrahimDepartment of Biosciences, COMSATS University Islamabad, Sahiwal Campus, Islamabad, Pakistan.
Ihtisham Ul HaqDepartment of Physical Chemistry and Technology of Polymers, Silesian University of Technology, Gliwice, Poland.
Wadi B AlonaziHealth Administration Department, College of Business Administration, King Saud University, Riyadh, Saudi Arabia.ORCID 0000-0002-3850-4437
Abdul Rauf SiddiqiDepartment of Biosciences, COMSATS University Islamabad, Islamabad Campus, Islamabad, Pakistan.
COMSATS University Islamabad · PKIslamia University of Bahawalpur · PKKing Saud University · SAUniversidade Federal de Minas Gerais · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cardiovascular disorders are the world's major cause of death nowadays. To treat cardiovascular diseases especially coronary artery diseases and hypertension, researchers found potential ROCK2 (Rho-associated coiled-coil-containing protein kinase 2) target due to its substantial role in NO-cGMP and RhoA/ROCK pathway. Available drugs for ROCK2 are less effective and some of them depict side effects. Therefore, a set of novel compounds were screened that can potentially inhibit the activity of ROCK2 and help to treat cardiovascular diseases by employing In-silico techniques. In this study, we undertook ligand based virtual screening of 50 million compound's library, to that purpose shape and features (contain functional groups) based pharmacophore query was modelled and validated by Area Under Curve graph (AUC). 2000 best hits were screened for Lipinski's rule of 5 compliance. Subsequently, these selected compounds were docked into the binding site of ROCK2 to gain insights into the interactions between hit compounds and the target protein. Based on binding affinity and RMSD scores, a final cohort of 15 compounds were chosen which were further refined by pharmacokinetics, ADMET and bioactivity scores. 2 potential hits were screened using density functional theory, revealing remarkable biological and chemical activity. Potential inhibitors (F847-0007 and 9543495) underwent rigorous examination through MD Simulations and MMGBSA analysis, elucidating their stability and strong binding affinities. Results of current study unveil the potential of identified novel hits as promising lead compounds for ROCK2 associated with cardiovascular diseases. These findings will further investigate via In-vitro and In-vivo studies to develop novel druglike molecules against ROCK2.

Indexed as

Cardiovascular DiseasesMolecular Dynamics SimulationBinding SitesHigh-Throughput Screening AssaysHumansMolecular Docking Simulationrho-Associated Kinasesrho-Associated KinasesROCK2 protein, human

Identifiers

PMID37972144
PMCPMC10653426
OpenAlexW4388728395

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.