Evidence map›Paper›PMID 37971964›Full record

ArticlePLoS biology2023

No assembly required: Time for stronger, simpler publishing standards for DNA sequences.

B W Thuronyi, Erika A DeBenedictis, Jeffrey E Barrick

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Self-documenting plasmids.Trends in biotechnology · 2025
    Review
  6. Article
  7. Article
  8. Sequencing Strategy to Ensure Accurate Plasmid Assembly.bioRxiv : the preprint server for biology · 2024
    Article
  9. PlasCAT: Plasmid Cloud Assembly Tool.Bioinformatics (Oxford, England) · 2024
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

B W ThuronyiDepartment of Chemistry, Williams College, Williamstown, Massachusetts, United States of America.
Erika A DeBenedictisBiodesign Laboratory, Francis Crick Institute, London, United Kingdom.
Jeffrey E BarrickDepartment of Molecular Biosciences, Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0003-0888-7358
The Francis Crick Institute · GBThe University of Texas at Austin · USWilliams College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Uniformly accessible DNA sequences are needed to improve experimental reproducibility and automation. Rather than descriptions of how engineered DNA is assembled, publishers should require complete and empirically validated sequences.

Indexed as

DNAPublishingAutomationBase SequenceReproducibility of ResultsDNA

Identifiers

PMID37971964
PMCPMC10653517
OpenAlexW4388734930

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.