Evidence map›Paper›PMID 37971847›Full record

ArticleEMBO reports2023

USP3 plays a critical role in the induction of innate immune tolerance.

Tianhao Duan, Yanchun Feng, Yang Du, Changsheng Xing, Junjun Chu, Jiayu Ou, Xin Liu, Motao Zhu, Chen Qian, Bingnan Yin and 3 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  5. Review
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  11. TRIF-dependent signaling and its role in liver diseases.Frontiers in cell and developmental biology · 2024
    Review
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Tianhao DuanDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-1737-6114
Yanchun FengMOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.ORCID 0009-0004-6139-1436
Yang DuDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Changsheng XingDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Junjun ChuDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Jiayu OuMOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.
Xin LiuDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0001-7949-1436
Motao ZhuDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Chen QianDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Bingnan YinDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Helen Y WangDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Jun CuiMOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.ORCID 0000-0002-8000-3708
Rong-Fu WangDepartment of Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-8834-2763
University of Southern California · USSun Yat-sen University · CN

Funding

Novel Strategies for Intervention of Inflammatory Diseases and Cancer - Research Supplement to R01-CA101795R01CA101795 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI WANG, RONGFU · 2004 to 2022
$4.6M
CD4+ T cells and neoantigens in melanoma immunotherapy.R01CA246547 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI WANG, RONGFU · 2021 to 2025
$3.1M
NCI NIH HHS R01 CA101795NCI NIH HHS R01 CA246547
6 · The paper itself

Abstract

Microbial products, such as lipopolysaccharide (LPS), can elicit efficient innate immune responses against invading pathogens. However, priming with LPS can induce a form of innate immune memory, termed innate immune "tolerance", which blunts subsequent NF-κB signaling. Although epigenetic and transcriptional reprogramming has been shown to play a role in innate immune memory, the involvement of post-translational regulation remains unclear. Here, we report that ubiquitin-specific protease 3 (USP3) participates in establishing "tolerance" innate immune memory through non-transcriptional feedback. Upon NF-κB signaling activation, USP3 is stabilized and exits the nucleus. The cytoplasmic USP3 specifically removes the K63-linked polyubiquitin chains on MyD88, thus negatively regulating TLR/IL1β-induced inflammatory signaling activation. Importantly, cytoplasmic translocation is a prerequisite step for USP3 to deubiquitinate MyD88. Additionally, LPS priming could induce cytoplasmic retention and faster and stronger cytoplasmic translocation of USP3, enabling it to quickly shut down NF-κB signaling upon the second LPS challenge. This work identifies a previously unrecognized post-translational feedback loop in the MyD88-USP3 axis, which is critical for inducing normal "tolerance" innate immune memory.

Indexed as

Myeloid Differentiation Factor 88NF-kappa BImmune ToleranceImmunity, InnateLipopolysaccharidesSignal TransductionLipopolysaccharidesMyeloid Differentiation Factor 88NF-kappa Binflammatory responseinnate immune memoryNF-κB signalingtoll-like receptorsubiquitination

Identifiers

PMID37971847
PMCPMC10702844
OpenAlexW4388769393

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.