Evidence map›Paper›PMID 37968394›Full record

ArticleNature2023

Illuminating protein space with a programmable generative model.

John B Ingraham, Max Baranov, Zak Costello, Karl W Barber, Wujie Wang, Ahmed Ismail, Vincent Frappier, Dana M Lord, Christopher Ng-Thow-Hing, Erik R Van Vlack and 16 more

Abstract read
In one paragraph

Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 230 papers.

0numbers the graph read from it
0cells of the map it votes in
230citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

230 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Scalable Production of aPharmaceutics · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

170 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

John B IngrahamGenerate Biomedicines, Somerville, MA, USA.
Max BaranovGenerate Biomedicines, Somerville, MA, USA.
Zak CostelloGenerate Biomedicines, Somerville, MA, USA.
Karl W BarberGenerate Biomedicines, Somerville, MA, USA.
Wujie WangGenerate Biomedicines, Somerville, MA, USA.
Ahmed IsmailGenerate Biomedicines, Somerville, MA, USA.ORCID 0000-0002-0104-6540
Vincent FrappierGenerate Biomedicines, Somerville, MA, USA.
Dana M LordGenerate Biomedicines, Somerville, MA, USA.
Christopher Ng-Thow-HingGenerate Biomedicines, Somerville, MA, USA.
Erik R Van VlackGenerate Biomedicines, Somerville, MA, USA.
Shan TieGenerate Biomedicines, Somerville, MA, USA.
Vincent XueGenerate Biomedicines, Somerville, MA, USA.
Sarah C CowlesGenerate Biomedicines, Somerville, MA, USA.ORCID 0000-0002-2246-6333
Alan LeungGenerate Biomedicines, Somerville, MA, USA.ORCID 0009-0007-8316-8499
João V RodriguesGenerate Biomedicines, Somerville, MA, USA.
Claudio L Morales-PerezGenerate Biomedicines, Somerville, MA, USA.
Alex M AyoubGenerate Biomedicines, Somerville, MA, USA.ORCID 0000-0003-0341-8747
Robin GreenGenerate Biomedicines, Somerville, MA, USA.
Katherine PuentesGenerate Biomedicines, Somerville, MA, USA.
Frank OplingerGenerate Biomedicines, Somerville, MA, USA.
Nishant V PanwarGenerate Biomedicines, Somerville, MA, USA.
Fritz ObermeyerGenerate Biomedicines, Somerville, MA, USA.
Adam R RootGenerate Biomedicines, Somerville, MA, USA.
Andrew L BeamGenerate Biomedicines, Somerville, MA, USA.
Frank J PoelwijkGenerate Biomedicines, Somerville, MA, USA.
Gevorg GrigoryanGenerate Biomedicines, Somerville, MA, USA. ggrigoryan@generatebiomedicines.com.ORCID 0000-0003-4645-7666

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Three billion years of evolution has produced a tremendous diversity of protein molecules

Indexed as

AlgorithmsComputer SimulationProtein ConformationProteinsBayes TheoremDirected Molecular EvolutionHumansMachine LearningModels, MolecularProtein FoldingSemanticsSynthetic BiologyProteins

Identifiers

PMID37968394
PMCPMC10686827

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.