Evidence map›Paper›PMID 37968303›Full record

ArticleScientific data2023

A chromosome-level genome assembly of the Knoxia roxburghii (Rubiaceae).

Yingmin Zhang, Fan Zhang, Ling Jin, Ticao Zhang, Xinying Pu, Bin Qiu, Guodong Li

Abstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Ethyl acetate extract ofFrontiers in pharmacology · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yingmin Zhang *College of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China.ORCID 0000-0002-8411-515X
Fan Zhang *College of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Ling JinCollege of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Ticao ZhangCollege of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Xinying PuCollege of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Bin QiuCollege of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China. yyqiubin@aliyun.com.ORCID 0000-0002-9378-8516
Guodong LiCollege of Chinese Material Medica, Yunnan University of Chinese Medicine, Kunming, 650500, China. gammar116@163.com.ORCID 0000-0002-9108-5454

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Knoxia roxburghii is a well-known medicinal plant that is widely distributed in southern China and Southeast Asia. Its dried roots, known as hongdaji in traditional Chinese medicine, are used to treat a range of diseases, including cancers, carbuncles, and ascites. In this study, we report a de novo chromosome-level genome sequence for this diploid plant, which has a length of approximately 446.30 Mb with a contig N50 size of 42.26 Mb and scaffold N50 size of 44.38 Mb. Approximately 99.78% of the assembled sequences were anchored to 10 pseudochromosomes and 3 gapless assembled chromosomes were included in this assembly. A total of 24,507 genes were annotated, along with 68.92% of repetitive elements. Overall, our results will facilitate further active component biosynthesis for K. roxburghii and provide insights for future functional genomic studies and DNA-informed breeding.

Indexed as

Genome, PlantRubiaceaeChromosomesGenomicsPhylogenyPlant Breeding

Identifiers

PMID37968303
PMCPMC10651836

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.