Evidence map›Paper›PMID 37966978›Full record

ArticleMicroscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada2023

Handling Difficult Cryo-ET Samples: A Study with Primary Neurons from Drosophila melanogaster.

Joseph Y Kim, Jie E Yang, Josephine W Mitchell, Lauren A English, Sihui Z Yang, Tanner Tenpas, Erik W Dent, Jill Wildonger, Elizabeth R Wright

Open access · greenAbstract read
In one paragraph

Article in Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. SLICK: A Sandwich-LIke Culturing Kit forbioRxiv : the preprint server for biology · 2025
    Article
  4. Recent advances in correlative cryo-light and electron microscopy.Current opinion in structural biology · 2024
    Review
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Joseph Y KimDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0002-6816-5958
Jie E YangDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Josephine W MitchellDepartment of Chemistry and Biochemistry, Kalamazoo College, Kalamazoo, MI 49006, USA.ORCID 0009-0002-7270-8780
Lauren A EnglishNeuroscience Training Program, University of Wisconsin-Madison, Madison, WI 53705, USA.
Sihui Z YangDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Tanner TenpasDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Erik W DentDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Jill WildongerDepartments of Pediatrics and Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Elizabeth R WrightDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0003-0712-9475
University of Wisconsin–Madison · USKalamazoo College · USStanford University · USUniversity of California San Diego · US

Funding

The Midwest Center for Cryo-Electron TomographyU24GM139168 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WRIGHT, ELIZABETH R · 2020 to 2025
$41.7M
F-BAR proteins in neuronal migration and process formationR01NS115400 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI DENT, ERIK W · 2021 to 2025
$1.9M
MOLECULAR MOTORS AND NEURONAL MICROTUBULE POLARITYR01NS102385 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI WILDONGER, JILL C · 2017 to 2022
$1.6M
Structural Investigations Of Macromolecular Complexes Critical To hRSV Life CycleR01GM114561 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI SANTANGELO, PHILIP J, WRIGHT, ELIZABETH R · 2016 to 2019
$1.6M
NIGMS NIH HHS R01 GM114561NIGMS NIH HHS U24 GM139168NINDS NIH HHS R01 NS102385NINDS NIH HHS R01 NS115400
6 · The paper itself

Abstract

Cellular neurobiology has benefited from recent advances in the field of cryo-electron tomography (cryo-ET). Numerous structural and ultrastructural insights have been obtained from plunge-frozen primary neurons cultured on electron microscopy grids. With most primary neurons having been derived from rodent sources, we sought to expand the breadth of sample availability by using primary neurons derived from 3rd instar Drosophila melanogaster larval brains. Ultrastructural abnormalities were encountered while establishing this model system for cryo-ET, which were exemplified by excessive membrane blebbing and cellular fragmentation. To optimize neuronal samples, we integrated substrate selection, micropatterning, montage data collection, and chemical fixation. Efforts to address difficulties in establishing Drosophila neurons for future cryo-ET studies in cellular neurobiology also provided insights that future practitioners can use when attempting to establish other cell-based model systems.

Indexed as

Drosophila melanogasterNeuronsAnimalsCryoelectron MicroscopyElectron Microscope Tomographychemical fixationcryo-electron microscopy (cryo-EM)cryo-electron tomography (cryo-ET)Drosophila melanogasterfluorescence light microscopymembrane blebsmicropatterningprimary neuronsvaricosity

Identifiers

PMID37966978
PMCPMC11168236
OpenAlexW4388692286

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.