Evidence map›Paper›PMID 37966891›Full record

ArticleJMIR cancer2023

Open-Source, Step-Counting Algorithm for Smartphone Data Collected in Clinical and Nonclinical Settings: Algorithm Development and Validation Study.

Marcin Straczkiewicz, Nancy L Keating, Embree Thompson, Ursula A Matulonis, Susana M Campos, Alexi A Wright, Jukka-Pekka Onnela

Abstract read
In one paragraph

Article in JMIR cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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  6. Comparing Step-Counting Algorithms for High-Resolution Wrist Accelerometry Data in Older Adults in the ARIC Study.The journals of gerontology. Series A, Biological sciences and medical sciences · 2025
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  8. Observational
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Marcin StraczkiewiczDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, United States.ORCID https://orcid.org/0000-0002-8703-4451
Nancy L KeatingDepartment of Health Care Policy, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-8274-4681
Embree ThompsonDana Farber Cancer Institute, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0003-0766-4726
Ursula A MatulonisDana Farber Cancer Institute, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-3103-6992
Susana M CamposDana Farber Cancer Institute, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0001-9672-473X
Alexi A Wright *Dana Farber Cancer Institute, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-9776-7114
Jukka-Pekka Onnela *Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, United States.ORCID https://orcid.org/0000-0001-6613-8668

Funding

Integrating lifecourse approaches, biologic and digital phenotypes in support of heart and lung disease epidemiologic researchU01HL145386 · NHLBI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI CHAVARRO, JORGE EDUARDO, MANSON, JOANN ELISABETH · 2019 to 2025
$17.8M
Project 2: Combined personal neoantigen-targeting cancer vaccines with immune checkpoint blockade for ovarian cancerP50CA240243 · NCI · DANA-FARBER CANCER INST · PI CASTRO, CESAR M · 2020 to 2024
$11.5M
Neurodevelopmental Mechanisms Underlying Stress Vulnerability during AdolescenceR37MH119194 · NIMH · HARVARD UNIVERSITY · PI Katie McLaughlin · 2020 to 2026
$10.6M
Project 3: Cumulative Risk and Geospatial Health Disparities Related to Chemical and Non-Chemical Stressor ExposuresP50MD010428 · NIMHD · HARVARD SCHOOL OF PUBLIC HEALTH · PI LADEN, FRANCINE, LEVY, JONATHAN I · 2015 to 2020
$4.0M
BOLSTER: Strengthening Patient and Caregiver Supports in Advanced Gynecologic and Gastrointestinal Cancers - a Multi-Site Randomized Controlled TrialR01CA270040 · NCI · DANA-FARBER CANCER INST · PI Alexi A Wright · 2023 to 2026
$2.8M
Passive Data to Improve Outcomes in Advanced CancerR21NR018532 · NINR · DANA-FARBER CANCER INST · PI ONNELA, JUKKA-PEKKA, WRIGHT, ALEXI A · 2019 to 2020
$459k
NCI NIH HHS P50 CA240243NCI NIH HHS R01 CA270040NHLBI NIH HHS U01 HL145386NIMHD NIH HHS P50 MD010428NIMH NIH HHS R37 MH119194NINR NIH HHS R21 NR018532
6 · The paper itself

Abstract

backgroundStep counts are increasingly used in public health and clinical research to assess well-being, lifestyle, and health status. However, estimating step counts using commercial activity trackers has several limitations, including a lack of reproducibility, generalizability, and scalability. Smartphones are a potentially promising alternative, but their step-counting algorithms require robust validation that accounts for temporal sensor body location, individual gait characteristics, and heterogeneous health states.

objectiveOur goal was to evaluate an open-source, step-counting method for smartphones under various measurement conditions against step counts estimated from data collected simultaneously from different body locations ("cross-body" validation), manually ascertained ground truth ("visually assessed" validation), and step counts from a commercial activity tracker (Fitbit Charge 2) in patients with advanced cancer ("commercial wearable" validation).

methodsWe used 8 independent data sets collected in controlled, semicontrolled, and free-living environments with different devices (primarily Android smartphones and wearable accelerometers) carried at typical body locations. A total of 5 data sets (n=103) were used for cross-body validation, 2 data sets (n=107) for visually assessed validation, and 1 data set (n=45) was used for commercial wearable validation. In each scenario, step counts were estimated using a previously published step-counting method for smartphones that uses raw subsecond-level accelerometer data. We calculated the mean bias and limits of agreement (LoA) between step count estimates and validation criteria using Bland-Altman analysis.

resultsIn the cross-body validation data sets, participants performed 751.7 (SD 581.2) steps, and the mean bias was -7.2 (LoA -47.6, 33.3) steps, or -0.5%. In the visually assessed validation data sets, the ground truth step count was 367.4 (SD 359.4) steps, while the mean bias was -0.4 (LoA -75.2, 74.3) steps, or 0.1%. In the commercial wearable validation data set, Fitbit devices indicated mean step counts of 1931.2 (SD 2338.4), while the calculated bias was equal to -67.1 (LoA -603.8, 469.7) steps, or a difference of 3.4%.

conclusionsThis study demonstrates that our open-source, step-counting method for smartphone data provides reliable step counts across sensor locations, measurement scenarios, and populations, including healthy adults and patients with cancer.

Indexed as

accelerometercanceropen-sourcesmartphonestep countvalidationwearable

Identifiers

PMID37966891
PMCPMC10687676

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.